Gene CPS_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4876 
Symbol 
ID3521577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp5172042 
End bp5172668 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content36% 
IMG OID637287315 
ProductTetR family transcriptional regulator 
Protein accessionYP_271515 
Protein GI71281108 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0224524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGTAA AAAAAGAATC TGTAGGGCAA GTTCGCCAAA GAAATGTTGC ACTTATTTTA 
ACAGCGGCCA AAACAGAGTT TGTTACACAT GGCTTTAAAG GTGCGTCAAT TAAACGCATC 
GCTGAACGTG CAAATATTCC TCGAGCAAAT ATCCATTATT ATTTCGATGA CAAAACTGAT 
CTTTATCAGC AATTACTCAC TGAAATAATT GTCAGCTGGA ATACTAGTTT CGATACCTTA 
AGCATTGATG ATGATCCTAA AACAATTCTT ACTGCTTATA TTCATGAAAA AATCATGCAT 
GCCAAACATG ATCCTGATGG ATCAAAAATA TTTGCCAGTG AAGTCATTCA TGGCGCGCCT 
ATTCTTAAAG ACTATTTGCA TACTGAATTT AAGCAATGGT TAGATGAAAA AATCACCATC 
ATTGAAACCT GGATTAAACA AGGTCAAATA GATGTAATCA ACCCACATCA CTTGTTATTC 
CTTATTTGGA GTTCCACCCA GCATTATGCT GACTTTAATG TGCAGGTATT GGCTGGTTTT 
GGTAAAGAGG CAATGAACGA TGATGATTTT GATGATGTAA TCCAGTCACT GACTTCAATT 
ATCCTAAAAG GCTGCGGTTT ATCTTAA
 
Protein sequence
MSVKKESVGQ VRQRNVALIL TAAKTEFVTH GFKGASIKRI AERANIPRAN IHYYFDDKTD 
LYQQLLTEII VSWNTSFDTL SIDDDPKTIL TAYIHEKIMH AKHDPDGSKI FASEVIHGAP 
ILKDYLHTEF KQWLDEKITI IETWIKQGQI DVINPHHLLF LIWSSTQHYA DFNVQVLAGF 
GKEAMNDDDF DDVIQSLTSI ILKGCGLS