Gene CPS_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1965 
Symbol 
ID3522895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2033700 
End bp2034332 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content37% 
IMG OID637284427 
ProductTetR family transcriptional regulator 
Protein accessionYP_268695 
Protein GI71282421 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.885807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGTG CTAATCTAAT AAAAAAAACA GGTAATATTC GAGTAAAGAG TCAAGTTAAG 
ATTCTATCGG CAGCCAGAAC AGAGTTTGTA CTGCAAGGCT ATAGGGGTGC AACAGTTCAG 
TCTATTGCTG ATAGAGCTGA GCTACCCAAG GCAAATGTCC TCTATTATTT CAAAAACAAA 
GAGAATATTT ATCATGCTGT ACTAGAAAAT ACACTTCAAA TGTGGGACGA AGGTATTGGA 
GATATTGAGC AAAACGAAGG ACCTAAAGTT GCCATAGAAA AATTTATCGC CGCCAAGGTA 
AGAATGTCAT TTAAACACCC TGAAGCATCA AAGATATATG CCATGGAAGT TATCCAAGGC 
GCGCAACACC TGAAAGATTA TGCTCGAACA TACCAACGCC AATGGGTAAG AGAAAAAGCT 
AAGTTATTTC AACAGTGGAT AGACAACGGT GAGATGGTTA ATGTTGATCC CGTTCATCTT 
ATTTTCCTTA TTTGGTCTTC TACCCAGCAT TACGCTGATT TTGACACCCA AATATTAACC 
ATAATGAATC AAGCTGATTT CGAAGATGAT GATGTTGAAA AAGTTATCGC ATTTTTGTCA 
GACATTATTT TACGTGGTTG CGGCTTAATT TAA
 
Protein sequence
MTSANLIKKT GNIRVKSQVK ILSAARTEFV LQGYRGATVQ SIADRAELPK ANVLYYFKNK 
ENIYHAVLEN TLQMWDEGIG DIEQNEGPKV AIEKFIAAKV RMSFKHPEAS KIYAMEVIQG 
AQHLKDYART YQRQWVREKA KLFQQWIDNG EMVNVDPVHL IFLIWSSTQH YADFDTQILT 
IMNQADFEDD DVEKVIAFLS DIILRGCGLI