More than 300 homologs were found in PanDaTox collection
for query gene Dret_0822 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_0822  two component transcriptional regulator, LuxR family  100 
 
 
223 aa  456  1e-127  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.628591  normal  0.692285 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  37.44 
 
 
230 aa  141  7e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  36.02 
 
 
218 aa  137  2e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  34.56 
 
 
235 aa  135  6.0000000000000005e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  36.07 
 
 
224 aa  134  9.999999999999999e-31  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.07 
 
 
224 aa  132  3e-30  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  36.99 
 
 
230 aa  132  3.9999999999999996e-30  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  35.45 
 
 
223 aa  132  3.9999999999999996e-30  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  36.92 
 
 
217 aa  131  6e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  36.36 
 
 
226 aa  131  7.999999999999999e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  35.62 
 
 
224 aa  131  9e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  35.62 
 
 
224 aa  131  9e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  34.45 
 
 
214 aa  130  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.38 
 
 
213 aa  129  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  36.06 
 
 
225 aa  129  3e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  34.27 
 
 
215 aa  129  5.0000000000000004e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  34.27 
 
 
215 aa  129  5.0000000000000004e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  37.85 
 
 
226 aa  129  5.0000000000000004e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  34.27 
 
 
215 aa  129  5.0000000000000004e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  36.02 
 
 
220 aa  128  9.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  34.86 
 
 
217 aa  127  1.0000000000000001e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  34.76 
 
 
218 aa  127  1.0000000000000001e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  35.94 
 
 
219 aa  127  1.0000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  35.75 
 
 
219 aa  126  2.0000000000000002e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  33.5 
 
 
241 aa  125  4.0000000000000003e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  36.84 
 
 
222 aa  125  4.0000000000000003e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  36.74 
 
 
223 aa  125  4.0000000000000003e-28  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  36.74 
 
 
223 aa  125  4.0000000000000003e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  36.87 
 
 
209 aa  125  5e-28  Yersinia pestis Angola  Bacteria  normal  normal  0.0858473 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  36.87 
 
 
209 aa  125  5e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  33.94 
 
 
214 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  35.21 
 
 
207 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  30.37 
 
 
212 aa  125  5e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  36.19 
 
 
217 aa  124  8.000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  36.87 
 
 
209 aa  125  8.000000000000001e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.45 
 
 
224 aa  124  8.000000000000001e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  35.38 
 
 
217 aa  124  9e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  33.49 
 
 
214 aa  124  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  37.38 
 
 
221 aa  124  1e-27  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  33.18 
 
 
225 aa  124  1e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  34.1 
 
 
241 aa  124  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  35.27 
 
 
219 aa  124  1e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  33.8 
 
 
217 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  35.45 
 
 
230 aa  124  1e-27  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.72 
 
 
224 aa  124  1e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  34.72 
 
 
228 aa  123  2e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  35.55 
 
 
220 aa  123  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  36.11 
 
 
244 aa  123  2e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  35.64 
 
 
219 aa  123  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  35.18 
 
 
210 aa  123  2e-27  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  35.51 
 
 
224 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  32.86 
 
 
228 aa  123  3e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  36.45 
 
 
224 aa  122  3e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  36.87 
 
 
219 aa  122  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  35.38 
 
 
206 aa  122  4e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  35.19 
 
 
225 aa  122  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  36.32 
 
 
212 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.48 
 
 
224 aa  122  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  35.05 
 
 
213 aa  122  4e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  31.6 
 
 
215 aa  122  5e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  34.63 
 
 
217 aa  122  5e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010571  Oter_1239  two component LuxR family transcriptional regulator  35.23 
 
 
196 aa  122  5e-27  Opitutus terrae PB90-1  Bacteria  normal  0.0482404  normal  0.916816 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  35.38 
 
 
215 aa  122  6e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  31.7 
 
 
209 aa  122  6e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  35.94 
 
 
220 aa  122  6e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  35.24 
 
 
221 aa  122  6e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  35.85 
 
 
213 aa  122  6e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  34.63 
 
 
234 aa  121  7e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  35.38 
 
 
216 aa  121  7e-27  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  35.78 
 
 
218 aa  121  8e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  33.64 
 
 
214 aa  121  8e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  34.93 
 
 
227 aa  121  9e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  35.38 
 
 
212 aa  121  9e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  34.78 
 
 
213 aa  121  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  35.51 
 
 
211 aa  120  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  32.71 
 
 
234 aa  121  9.999999999999999e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  33.18 
 
 
223 aa  120  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  36.41 
 
 
220 aa  120  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  31.63 
 
 
213 aa  120  9.999999999999999e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  35.35 
 
 
222 aa  121  9.999999999999999e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  32.86 
 
 
218 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  34.55 
 
 
223 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  33.33 
 
 
219 aa  120  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  35.35 
 
 
225 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  33 
 
 
212 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  33.8 
 
 
225 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  34.6 
 
 
214 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.33 
 
 
218 aa  120  1.9999999999999998e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  34.93 
 
 
217 aa  120  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  34.12 
 
 
218 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  36.62 
 
 
221 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  33.65 
 
 
213 aa  119  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  35.91 
 
 
221 aa  120  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  36.89 
 
 
214 aa  119  3e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  35.96 
 
 
215 aa  119  3e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  33.49 
 
 
220 aa  119  3e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  34.29 
 
 
227 aa  119  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  33.48 
 
 
212 aa  119  3e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  34.88 
 
 
232 aa  119  3.9999999999999996e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.88 
 
 
222 aa  119  3.9999999999999996e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
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