More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0575 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0575  binding-protein-dependent transport systems inner membrane component  100 
 
 
292 aa  578  1e-164  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2104  permease protein  67.02 
 
 
329 aa  369  1e-101  Bacillus cereus AH187  Bacteria  normal  0.377288  n/a   
 
 
-
 
NC_013515  Smon_0143  binding-protein-dependent transport systems inner membrane component  63.95 
 
 
294 aa  367  1e-101  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013171  Apre_1668  binding-protein-dependent transport systems inner membrane component  57.79 
 
 
284 aa  331  9e-90  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.771633  n/a   
 
 
-
 
NC_008262  CPR_0542  transmembrane transport protein  42.96 
 
 
293 aa  242  6e-63  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0558  ABC transporter, permease protein  42.96 
 
 
293 aa  241  7.999999999999999e-63  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2049  sugar ABC transporter (permease)  34.4 
 
 
303 aa  183  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.907779  normal 
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
284 aa  182  6e-45  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
281 aa  174  1.9999999999999998e-42  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
285 aa  166  2.9999999999999998e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_008541  Arth_1707  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
303 aa  164  1.0000000000000001e-39  Arthrobacter sp. FB24  Bacteria  normal  0.384192  n/a   
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  34.42 
 
 
303 aa  164  2.0000000000000002e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
303 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_013131  Caci_1939  binding-protein-dependent transport systems inner membrane component  32.6 
 
 
314 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0503026  normal  0.979613 
 
 
-
 
NC_013595  Sros_5530  sugar ABC transporter (permease)  32.68 
 
 
292 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.30156 
 
 
-
 
NC_013947  Snas_2857  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
298 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.705306  normal 
 
 
-
 
NC_013595  Sros_7705  sugar ABC transporter (permease)  33.56 
 
 
301 aa  155  8e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.675914 
 
 
-
 
NC_013595  Sros_2253  sugar ABC transporter (permease)  30.92 
 
 
281 aa  153  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal  0.273878 
 
 
-
 
NC_013131  Caci_0889  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
302 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.505045  normal  0.0752536 
 
 
-
 
NC_009380  Strop_2981  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
319 aa  149  5e-35  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0908171 
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
279 aa  148  9e-35  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
275 aa  147  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0750  sugar ABC transporter, permease protein, putative  31.21 
 
 
275 aa  146  4.0000000000000006e-34  Brucella suis 1330  Bacteria  normal  0.688885  n/a   
 
 
-
 
NC_009953  Sare_3205  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
319 aa  146  4.0000000000000006e-34  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.450418 
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  30 
 
 
278 aa  145  6e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6267  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
296 aa  145  6e-34  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3897  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
275 aa  144  2e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.965768  n/a   
 
 
-
 
NC_009504  BOV_A0700  putative sugar ABC transporter, permease protein  30.85 
 
 
275 aa  143  3e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.480284  n/a   
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  28.04 
 
 
288 aa  142  5e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1524  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
298 aa  142  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3817  binding-protein-dependent transport systems inner membrane component  28.32 
 
 
283 aa  142  7e-33  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27720  ABC-type sugar transport system, permease component  33.09 
 
 
284 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.333543  n/a   
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
303 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_007488  RSP_3943  ABC sugar transporter, inner membrane subunit  28.83 
 
 
281 aa  138  1e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0114669  n/a   
 
 
-
 
NC_013172  Bfae_30850  ABC-type sugar transport system, permease component  32.75 
 
 
315 aa  137  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
293 aa  137  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1018  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
289 aa  136  4e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.062951  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
279 aa  136  4e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_013526  Tter_2293  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
297 aa  135  5e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4423  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
279 aa  134  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.389703 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
299 aa  135  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
281 aa  135  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_011886  Achl_2662  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
304 aa  134  1.9999999999999998e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
293 aa  134  1.9999999999999998e-30  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
271 aa  134  1.9999999999999998e-30  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
276 aa  134  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1135  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
276 aa  134  1.9999999999999998e-30  Clostridium cellulolyticum H10  Bacteria  normal  0.776984  n/a   
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
281 aa  134  1.9999999999999998e-30  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  32.79 
 
 
295 aa  134  3e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
283 aa  133  3e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
278 aa  133  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
278 aa  133  3e-30  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_012034  Athe_0616  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
275 aa  133  3.9999999999999996e-30  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7723  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
279 aa  133  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
285 aa  132  5e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4059  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
281 aa  132  7.999999999999999e-30  Burkholderia phymatum STM815  Bacteria  normal  0.965906  normal  0.767737 
 
 
-
 
NC_011898  Ccel_3244  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
279 aa  131  1.0000000000000001e-29  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
285 aa  130  2.0000000000000002e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0506  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
294 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_7206  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
283 aa  130  2.0000000000000002e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  28.37 
 
 
275 aa  130  2.0000000000000002e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11560  carbohydrate ABC transporter membrane protein  27.82 
 
 
301 aa  129  5.0000000000000004e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.626059  hitchhiker  0.00742077 
 
 
-
 
NC_013421  Pecwa_1319  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
282 aa  129  5.0000000000000004e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0499558  n/a   
 
 
-
 
NC_013159  Svir_11600  carbohydrate ABC transporter membrane protein  26.55 
 
 
283 aa  129  7.000000000000001e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2960  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
282 aa  129  8.000000000000001e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0179548  n/a   
 
 
-
 
NC_007952  Bxe_B0418  ABC sugar transporter, inner membrane subunit  28.98 
 
 
283 aa  129  8.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5822  putative sugar uptake ABC transporter permease protein  30.66 
 
 
298 aa  129  8.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.546263  normal 
 
 
-
 
NC_012669  Bcav_3677  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
304 aa  128  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.842824 
 
 
-
 
NC_008254  Meso_1096  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
277 aa  128  1.0000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
280 aa  128  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
275 aa  127  2.0000000000000002e-28  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_012669  Bcav_2717  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
276 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.621344  normal  0.190746 
 
 
-
 
NC_010001  Cphy_1881  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
426 aa  127  2.0000000000000002e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
273 aa  127  3e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2070  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
297 aa  126  4.0000000000000003e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0665879  normal 
 
 
-
 
NC_013595  Sros_8234  maltose transport protein  28.98 
 
 
271 aa  126  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.367769  normal 
 
 
-
 
NC_013525  Tter_0185  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
301 aa  125  6e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_2364  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
661 aa  125  7e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.824137  normal  0.513217 
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
294 aa  125  8.000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_013131  Caci_0627  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
315 aa  125  9e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.266328 
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
293 aa  124  1e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_007802  Jann_4088  binding-protein-dependent transport systems inner membrane component  27.89 
 
 
275 aa  124  1e-27  Jannaschia sp. CCS1  Bacteria  normal  normal  0.350213 
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  29.05 
 
 
290 aa  125  1e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  29.37 
 
 
281 aa  124  1e-27  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
294 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_010001  Cphy_3860  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
291 aa  124  1e-27  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1369  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
297 aa  124  1e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
273 aa  125  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2678  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
289 aa  124  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4567  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
299 aa  124  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
280 aa  124  2e-27  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_011729  PCC7424_1897  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
291 aa  124  2e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.3984100000000001e-18 
 
 
-
 
NC_012669  Bcav_0312  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
298 aa  124  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
281 aa  124  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  27.86 
 
 
304 aa  123  3e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2795  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
298 aa  124  3e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
297 aa  123  3e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_011369  Rleg2_3620  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
287 aa  123  4e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0499  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
279 aa  123  4e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.398115  hitchhiker  0.000223606 
 
 
-
 
NC_013947  Snas_2760  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
290 aa  123  4e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.309927  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>