Gene Bxe_B0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0418 
Symbol 
ID4009093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2910300 
End bp2911151 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID637952259 
ProductABC sugar transporter, inner membrane subunit 
Protein accessionYP_554879 
Protein GI91779671 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCA GCATCAAGAT GAAGCGTTCG CTGTGGTGCT GGCTCGCGCT GTCGCCGCTG 
GTCGTGGTGG TGCTGTTTCC GTTTGCCGTC ATGCTGTTCA CCGCTTTGAA GCCGGCGTCA
GAGATATTTG TCTACCCGGC GCGGTGGCTG CCGGTGCATT GGCAGTGGAG CAATTTCTCC
GACATGTGGG TGGCTGCCAA TTTCGGCGTG GCGCTGCGCA ACAGCACGGT GATCAGCTTG
CTGTCGACCG CGCTTGCGCT GGCCGTCAGT CTGCCGGCCG CTTATGCGTT GGCGAGATTT
CCGTTTCGCG GACGCGGCTT CTACCGTCAG TTTCTGCTCG TGACGCAGAT GCTGTCGCCT
ATTCTGCTCG TGGTCGGGTT GTTCCGGCTG GCGGCGATGA TTCCTTATGG CGACGGCAAC
CTGGTGGACT CCAGAATCGG CGTGATCGTG TCTTACGCAG CCTTCAATAT CGCGTTCGCC
GTGTGGATGC TGTCTTCGTA CTTTCAGACG GTGCCGCGCG ATCTGGAAGA GTCTGCGTGG
CTCGAAGGAT GCGGACGGAC CAAGGCGGTC TTCAAGGTGT TCCTGCCGCT CGCGGTGCCT
GCGATTGTCG TCACCGCGAT CTTCACATTC ATCAACGCGT GGAACGAGTT CGCTGTGGTT
TATACGTTGA TCCGCTCGCC GGAAAACAAG ACGCTGACCG TGCAGGTCAC CGACATGGTT
GCCGGGAAAT ACGTGGTGGA GTGGCATCTG GTCATGGCCG CCACGCTCTG CGCGACGCTG
CCGGTTTCGG TTGTGTTCGC GTGGCTACAG CGGTATCTGG TGAAGGGACT CGCGTTGGGC
GCGGTGAAGT AG
 
Protein sequence
MSLSIKMKRS LWCWLALSPL VVVVLFPFAV MLFTALKPAS EIFVYPARWL PVHWQWSNFS 
DMWVAANFGV ALRNSTVISL LSTALALAVS LPAAYALARF PFRGRGFYRQ FLLVTQMLSP
ILLVVGLFRL AAMIPYGDGN LVDSRIGVIV SYAAFNIAFA VWMLSSYFQT VPRDLEESAW
LEGCGRTKAV FKVFLPLAVP AIVVTAIFTF INAWNEFAVV YTLIRSPENK TLTVQVTDMV
AGKYVVEWHL VMAATLCATL PVSVVFAWLQ RYLVKGLALG AVK