| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1939 |
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| Symbol | |
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| ID | 8333282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2194179 |
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| End bp | 2195123 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644955088 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003112700 |
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| Protein GI | 256391136 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0503026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.979613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGG ACATGACGGA GACCTCGCCG ACGACCGCCA AGACGGCGGG CGGCAAACCC
GGCAAGCCCG GCAAGCCCGG CAAAGGCGAG CGCGCGGGCC GCTTCGGCGA ATCCGGCGCG
ACCCTGAACG TATTCGGCAC CGGCTTCATG GCGGTCTGGG CCATCATGGT CCTGGGCCCG
GTCCTGTGGG TGATCCTCGG CGCCTTCAAG AACACCAGCG AACTCAACGG CAGCGCCTGG
TCCTGGCCCC ACCACTTCTC CTTCGACGCC TTCAGCCGCG CCTGGCACAC CGGCATCAGC
ACCTACCTGA AGGACACCCT CATCGTCCTG GTGTTCTCGG TGTCCCTGAC GATGCTGCTC
GGCGCCATGG CGGCCTACGT CCTGGCCCGC TTCGAGTTCC GCGGCAACAG GTTCATCTAC
TACCTGTTCG TCTCCGGCGT GATGCTCCCG GTCTACCTGG CCCTGGTCCC CCTGTTCTTC
CAGGTGAGCA AGCTGCACAT GCTGAACACC TACCAAGGCC TGGTCCTGGT CTACGTCGCC
TTCTCGATGC CCTTCACGGT GTTCTTCCTG CACTCCTTCT TCAAAACACT CCCCTCAGCA
GTCTTCGAAG CAGCCCAGAT CGACGGCGCC TCCCACACCC GCGCCTTCTT CCAGGTGATG
CTCCCGATGG CCAAACCCGG CCTGATCAGC GTGGGCATCT TCAACATCCT GGGCCAGTGG
AACCAGTACC TGCTCCCCGT GGTCCTGATG CAGTCCCAAC ACGGCGAGGC ACCGCACTAC
ATGCTGTCGC AGGGCCTGGT GTCCCTCATG GTGGCGCAGG GCTACAGCGG CGACTTCCCC
GCCCTGTTCG CGGGCATGAC GATCGCGATG CTGCCGGTGA TGGCGGTGTA TCTGTCCTTC
CAGCGCCAGG TGCAGGCCGG ACTGACGGCG GGGACTTTGA AGTAG
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| Protein sequence | MAADMTETSP TTAKTAGGKP GKPGKPGKGE RAGRFGESGA TLNVFGTGFM AVWAIMVLGP
VLWVILGAFK NTSELNGSAW SWPHHFSFDA FSRAWHTGIS TYLKDTLIVL VFSVSLTMLL
GAMAAYVLAR FEFRGNRFIY YLFVSGVMLP VYLALVPLFF QVSKLHMLNT YQGLVLVYVA
FSMPFTVFFL HSFFKTLPSA VFEAAQIDGA SHTRAFFQVM LPMAKPGLIS VGIFNILGQW
NQYLLPVVLM QSQHGEAPHY MLSQGLVSLM VAQGYSGDFP ALFAGMTIAM LPVMAVYLSF
QRQVQAGLTA GTLK
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