| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1018 |
|---|
| Symbol | |
|---|
| ID | 4811312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1218258 |
|---|
| End bp | 1219127 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640106436 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001037443 |
|---|
| Protein GI | 125973533 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.062951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA TAGGTTATTT TGAATCGATG AAAAGAAAGA AAAAAATTAA GGATACCATT
GCCAATATAA TTCTCGCTAT ATTGGTGGTA TTAACCCTCG GACCCATAGT ATTCATGGTG
CTGACATCTT TGATGGATCA TAATGCCATT GCAAGGGGTA AATGGATTGC ACCTACTCGA
TTCTCAAACT ATGTTGAAGT CTTCCAAAAA CTTCCTTTCG GTATTTATTT CAGAAACAGT
CTTATTGTAT GTTCAATTGT TATGGTTGTG GCGCTCGTTA TTGCAACGCT TGCAGGTTAC
TCTTTGGCAA AATACAAATT TCCGGGGTCA GGTTTCTTTG GTATTCTTAT TCTTGCAACG
CAATTGCTTC CTGGAATGAT GTTCTTGCTT CCTCTTTATC TCGACTTTGT TAAAATTAAG
CAAGCAACCG GAATACAGCT GATAAACTCG ATTCCAGGAC TTGTAATAGT ATATTCGGCG
TTTTTCGTTC CTTTCAGTAT CTGGATCATC AGAGGATTCT TTGCGTCCAT ACCCGGTGAG
CTTGAAGAAG CTGCCAGAAT AGACGGATGC AATAAATTTA CAGCTTTCCT GAGGGTAATG
CTTCCTTTGG CCGTTCCGGG AATTGTTGCG ACTGCAATAT ACATTTTCCT GACGGCTTGG
GATGAGCTGA TTTTTGCATG GGTTCTTCTC AAGGATACCA AGGTGACTAC TATTCCTGCC
GGTATCAGAG GCTTTATTGC ATACACAACT GCAAGATACG ATTTGCTGAT GGCAGCTGGT
ACTATAGTTA CTATTCCTGT ACTCATCATG TTCTTCACAA TGCAGAAGAA GTTCATCAGC
GGTATGACTG CCGGAGCAGT TAAGGGTTAA
|
|---|
| Protein sequence | MAKIGYFESM KRKKKIKDTI ANIILAILVV LTLGPIVFMV LTSLMDHNAI ARGKWIAPTR
FSNYVEVFQK LPFGIYFRNS LIVCSIVMVV ALVIATLAGY SLAKYKFPGS GFFGILILAT
QLLPGMMFLL PLYLDFVKIK QATGIQLINS IPGLVIVYSA FFVPFSIWII RGFFASIPGE
LEEAARIDGC NKFTAFLRVM LPLAVPGIVA TAIYIFLTAW DELIFAWVLL KDTKVTTIPA
GIRGFIAYTT ARYDLLMAAG TIVTIPVLIM FFTMQKKFIS GMTAGAVKG
|
|---|
| |