More than 300 homologs were found in PanDaTox collection
for query gene Ccel_3244 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_3244  binding-protein-dependent transport systems inner membrane component  100 
 
 
279 aa  546  1e-154  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
295 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  37.69 
 
 
299 aa  188  8e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  39.1 
 
 
277 aa  187  1e-46  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  38.57 
 
 
282 aa  187  2e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  38.34 
 
 
281 aa  187  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
281 aa  186  4e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
279 aa  184  1.0000000000000001e-45  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
275 aa  184  1.0000000000000001e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
278 aa  182  5.0000000000000004e-45  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
278 aa  182  5.0000000000000004e-45  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  38.35 
 
 
275 aa  181  8.000000000000001e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
285 aa  181  1e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
275 aa  176  3e-43  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
273 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
303 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_012803  Mlut_04600  ABC-type sugar transport system, permease component  36.4 
 
 
295 aa  174  1.9999999999999998e-42  Micrococcus luteus NCTC 2665  Bacteria  normal  0.539803  n/a   
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
271 aa  172  5.999999999999999e-42  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
283 aa  172  5.999999999999999e-42  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
275 aa  171  9e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
293 aa  171  9e-42  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
279 aa  171  9e-42  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
293 aa  170  2e-41  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  36.55 
 
 
295 aa  170  3e-41  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
294 aa  170  3e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  35.85 
 
 
294 aa  169  4e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
282 aa  169  4e-41  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
275 aa  169  4e-41  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
277 aa  169  5e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
277 aa  167  1e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
279 aa  166  2.9999999999999998e-40  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
276 aa  166  2.9999999999999998e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
311 aa  165  6.9999999999999995e-40  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
288 aa  165  8e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
286 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  34.5 
 
 
291 aa  164  2.0000000000000002e-39  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  34.5 
 
 
291 aa  164  2.0000000000000002e-39  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1135  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
276 aa  162  4.0000000000000004e-39  Clostridium cellulolyticum H10  Bacteria  normal  0.776984  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
276 aa  162  6e-39  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
283 aa  162  8.000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_007484  Noc_0280  ABC transporter, inner membrane subunit  33.46 
 
 
280 aa  161  9e-39  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.787211  n/a   
 
 
-
 
NC_008262  CPR_0542  transmembrane transport protein  33.93 
 
 
293 aa  161  1e-38  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  32.46 
 
 
283 aa  161  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2657  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
283 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2308  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
283 aa  160  1e-38  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000390677  n/a   
 
 
-
 
NC_013530  Xcel_2795  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
298 aa  160  2e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0558  ABC transporter, permease protein  33.57 
 
 
293 aa  160  2e-38  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
273 aa  160  2e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1097  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
280 aa  160  3e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal 
 
 
-
 
NC_014151  Cfla_0962  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
277 aa  160  3e-38  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0871909  hitchhiker  0.000355781 
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
277 aa  159  3e-38  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
285 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
287 aa  159  4e-38  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_013169  Ksed_20470  carbohydrate ABC transporter membrane protein  34.3 
 
 
289 aa  159  4e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0780045  normal  0.389193 
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
276 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  33.46 
 
 
303 aa  159  6e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2293  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
297 aa  159  6e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
276 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_013526  Tter_2500  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  158  7e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1668  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
284 aa  158  9e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.771633  n/a   
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
284 aa  157  1e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1490  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
277 aa  158  1e-37  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1329  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
279 aa  157  2e-37  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0589  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
283 aa  157  2e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.288724  normal 
 
 
-
 
NC_013595  Sros_7705  sugar ABC transporter (permease)  34.07 
 
 
301 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.675914 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  33.99 
 
 
286 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
285 aa  157  3e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3995  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
278 aa  156  3e-37  Mycobacterium sp. JLS  Bacteria  normal  0.273063  normal  0.368954 
 
 
-
 
NC_013947  Snas_4646  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
273 aa  156  3e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00194673 
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
281 aa  157  3e-37  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
293 aa  156  4e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_013947  Snas_2857  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
298 aa  156  4e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.705306  normal 
 
 
-
 
NC_009664  Krad_4145  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
306 aa  156  4e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  32.45 
 
 
283 aa  155  5.0000000000000005e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
279 aa  155  5.0000000000000005e-37  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_11560  carbohydrate ABC transporter membrane protein  34.46 
 
 
301 aa  155  5.0000000000000005e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.626059  hitchhiker  0.00742077 
 
 
-
 
NC_008146  Mmcs_3981  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
278 aa  156  5.0000000000000005e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
275 aa  156  5.0000000000000005e-37  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4055  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
278 aa  156  5.0000000000000005e-37  Mycobacterium sp. KMS  Bacteria  normal  normal  0.898469 
 
 
-
 
NC_012669  Bcav_2717  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
276 aa  156  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.621344  normal  0.190746 
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
281 aa  155  5.0000000000000005e-37  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20850  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
288 aa  155  6e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2235  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
276 aa  155  7e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2457  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
275 aa  155  9e-37  Meiothermus ruber DSM 1279  Bacteria  normal  0.741227  normal  0.869108 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
292 aa  154  1e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
275 aa  154  2e-36  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1017  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
276 aa  154  2e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  32.32 
 
 
278 aa  153  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0143  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
294 aa  153  2.9999999999999998e-36  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_21170  carbohydrate ABC transporter membrane protein  32.26 
 
 
302 aa  153  2.9999999999999998e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.281989  normal  0.140209 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  32.68 
 
 
297 aa  153  2.9999999999999998e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
281 aa  153  2.9999999999999998e-36  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3589  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
298 aa  153  2.9999999999999998e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.370604  normal 
 
 
-
 
NC_013947  Snas_0205  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
279 aa  152  4e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.67338  normal  0.16615 
 
 
-
 
NC_009565  TBFG_11262  sugar-transport integral membrane protein ABC transporter sugB  33.6 
 
 
274 aa  153  4e-36  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00203297 
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
274 aa  152  5e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2049  sugar ABC transporter (permease)  31.43 
 
 
303 aa  152  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.907779  normal 
 
 
-
 
NC_012792  Vapar_6267  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
296 aa  152  5.9999999999999996e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
271 aa  152  5.9999999999999996e-36  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_013757  Gobs_3932  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
277 aa  152  5.9999999999999996e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.410983  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>