| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20470 |
|---|
| Symbol | |
|---|
| ID | 8373551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2124888 |
|---|
| End bp | 2125757 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644992296 |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003149806 |
|---|
| Protein GI | 256825846 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.0780045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.389193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC AGCCGACCTC CACCAAGGGC AAGTGGCCCC TGTTCCTCAT CTCGCTGCTG
GTGATCGCCT ACACGATGAT CCCGCTGCTG TGGATGTTCG CCCTGTCCGT CAAGAGCGAC
GCGGCCCAGT CGAACACCGA GCTCAACACC TTCGGCAACT TCTGGCCCAC CGGCGAGGGG
TTCACCTGGG ACAACTACAC GCTGATCCTC ACCGGCGACG CGCAGCCGCT GTTCGTCCCG
GCGCTGATCA ACTCGATCGT GATCTGCCTT CTGGCCACCG TGATCTCGGT GGCGCTCGCC
ACGCTGTGTG CGTACGCGAT CAGCCGGCTG AAGTTCCCCG GCAAGGGCAT GATCCTGTTC
ACCGCGCTGA CGGTCAGCTT CTTCCCCGTG GTCTCGCTGG TGACGCCGAT CTTCAACGTG
TGGCGCACCA TCGGCCTGTT CGACACCATC CCCGGCCTGG TCATCCCCTA CCTGTCGCTC
ACGCTCCCGC TGGCCATCTG GACGCTGACG GCGTTCTTCC AGCAGATCCC GTGGGAGATG
GAGCAGGCGG CCCAGGTGGA CGGTGCCACC AGCTGGCAGG CCTTCCGCAA GGTGATCGTG
CCGCTGGCCC TGCCGGGTGT GTTCACCACG GCCATCATCG TGTTCTTCAC CGCATGGAAC
GACTTCGTGT TCGCGGTGTC GTTGTCCAGT GAGCAGGCAC GCACCGTGCC GGCCGCGCTG
GCCTTCTTCA CCGGCGCGAG CCAGTTCCAG CAGCCGACCG GCGCCATCGC AGCGGCCTCG
GTCATCGTCA CCATCCCGGT GGTCATCCTG GTGCTGCTCT TCCAGCGCCA GATTGTCGCC
GGCCTCACCT CGGGAGCCGT CAAGGGCTGA
|
|---|
| Protein sequence | MADQPTSTKG KWPLFLISLL VIAYTMIPLL WMFALSVKSD AAQSNTELNT FGNFWPTGEG
FTWDNYTLIL TGDAQPLFVP ALINSIVICL LATVISVALA TLCAYAISRL KFPGKGMILF
TALTVSFFPV VSLVTPIFNV WRTIGLFDTI PGLVIPYLSL TLPLAIWTLT AFFQQIPWEM
EQAAQVDGAT SWQAFRKVIV PLALPGVFTT AIIVFFTAWN DFVFAVSLSS EQARTVPAAL
AFFTGASQFQ QPTGAIAAAS VIVTIPVVIL VLLFQRQIVA GLTSGAVKG
|
|---|
| |