Gene Amir_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0809 
Symbol 
ID8324972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp887995 
End bp888840 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID644941351 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003098616 
Protein GI256374956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGA CCGGAGGAGC CGTCACCACC GGCCGCAAGG CCCGCTGGGC GGTGCTCAAC 
ACCGTCGTGG TCGCCTACGC GCTGATCCCC GTGCTGTGGA TCGTGTCGCT GTCGTTCAAG
ACGCCCGCGA CCCTGGCGGA CGGGAACTTC ATCCCGCGCG AGTGGACCCT GGAGAACTAC
CAGGCGATCT TCACCACGAG CGAGTTCGTC CGGGCGCTGG TGAACTCGAT CGGCATCGCC
CTGATCGCCA CCGCGATCGC CGTCGTGTTC GGCACCATGG CCGCCTACGC CATCGCCAGG
CTCGACTTCC CCGGCAAGCG CCTGCTCGTC GGCGTGTCCC TGCTGGTGTC GATGTTCCCG
CAGATCTCGC TGGTGTCGCC GCTGTTCGAG ATCGAGCGCA CCCTCGGGCT GTTCGACACC
TGGCCGGGCC TGATCCTGCC GTACACCACG TTCGCGCTGC CGCTGGCGAT CTACACGCTC
TCCGCGTTCT TCCGGGAGAT CCCGTGGGAG CTGGAGAAGG CGGCGAAGAT GGACGGCGCC
ACCCCCGGCC AGGCGTTCCG GCGGGTCATC GCCCCGCTGG CCGCGCCGGG CGTGTTCACC
ACGGCCATCC TGGTGTTCAT CTTCTGCTGG AACGACTTCC TGTTCGCCAT CTCGCTGACC
TCCACCGAGT CCTCGCGGAC CGTGCCGGTC GCGCTGTCGT TCTTCACCGG CAGCTCCCAG
TTCGAGGACC CGACCGGTTC CATCGCCGCC GCGGCGGTGG TCATCACGGT CCCGATCATC
GTGTTCGTGC TGTTCTTCCA GCGTCGCATC GTGGCCGGGC TGACCTCCGG CGCCGTCAAG
GGGTGA
 
Protein sequence
MAGTGGAVTT GRKARWAVLN TVVVAYALIP VLWIVSLSFK TPATLADGNF IPREWTLENY 
QAIFTTSEFV RALVNSIGIA LIATAIAVVF GTMAAYAIAR LDFPGKRLLV GVSLLVSMFP
QISLVSPLFE IERTLGLFDT WPGLILPYTT FALPLAIYTL SAFFREIPWE LEKAAKMDGA
TPGQAFRRVI APLAAPGVFT TAILVFIFCW NDFLFAISLT STESSRTVPV ALSFFTGSSQ
FEDPTGSIAA AAVVITVPII VFVLFFQRRI VAGLTSGAVK G