Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0809 |
Symbol | |
ID | 8324972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 887995 |
End bp | 888840 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644941351 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003098616 |
Protein GI | 256374956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGGA CCGGAGGAGC CGTCACCACC GGCCGCAAGG CCCGCTGGGC GGTGCTCAAC ACCGTCGTGG TCGCCTACGC GCTGATCCCC GTGCTGTGGA TCGTGTCGCT GTCGTTCAAG ACGCCCGCGA CCCTGGCGGA CGGGAACTTC ATCCCGCGCG AGTGGACCCT GGAGAACTAC CAGGCGATCT TCACCACGAG CGAGTTCGTC CGGGCGCTGG TGAACTCGAT CGGCATCGCC CTGATCGCCA CCGCGATCGC CGTCGTGTTC GGCACCATGG CCGCCTACGC CATCGCCAGG CTCGACTTCC CCGGCAAGCG CCTGCTCGTC GGCGTGTCCC TGCTGGTGTC GATGTTCCCG CAGATCTCGC TGGTGTCGCC GCTGTTCGAG ATCGAGCGCA CCCTCGGGCT GTTCGACACC TGGCCGGGCC TGATCCTGCC GTACACCACG TTCGCGCTGC CGCTGGCGAT CTACACGCTC TCCGCGTTCT TCCGGGAGAT CCCGTGGGAG CTGGAGAAGG CGGCGAAGAT GGACGGCGCC ACCCCCGGCC AGGCGTTCCG GCGGGTCATC GCCCCGCTGG CCGCGCCGGG CGTGTTCACC ACGGCCATCC TGGTGTTCAT CTTCTGCTGG AACGACTTCC TGTTCGCCAT CTCGCTGACC TCCACCGAGT CCTCGCGGAC CGTGCCGGTC GCGCTGTCGT TCTTCACCGG CAGCTCCCAG TTCGAGGACC CGACCGGTTC CATCGCCGCC GCGGCGGTGG TCATCACGGT CCCGATCATC GTGTTCGTGC TGTTCTTCCA GCGTCGCATC GTGGCCGGGC TGACCTCCGG CGCCGTCAAG GGGTGA
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Protein sequence | MAGTGGAVTT GRKARWAVLN TVVVAYALIP VLWIVSLSFK TPATLADGNF IPREWTLENY QAIFTTSEFV RALVNSIGIA LIATAIAVVF GTMAAYAIAR LDFPGKRLLV GVSLLVSMFP QISLVSPLFE IERTLGLFDT WPGLILPYTT FALPLAIYTL SAFFREIPWE LEKAAKMDGA TPGQAFRRVI APLAAPGVFT TAILVFIFCW NDFLFAISLT STESSRTVPV ALSFFTGSSQ FEDPTGSIAA AAVVITVPII VFVLFFQRRI VAGLTSGAVK G
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