| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3932 |
|---|
| Symbol | |
|---|
| ID | 8755617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4122868 |
|---|
| End bp | 4123701 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003410871 |
|---|
| Protein GI | 284992317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.410983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC GCGAGAAGAT CTGGTGGCTC ATCGGCGGGT TGGTCCTCGT CTTCTACTGC
CTGTTCCCGA TCGCCTGGAT CGTGTCCCTG TCGTTCAAGG CGCCGTCCGA CCTCGCCAAC
GGCGGGTTCC TGCCGACGCA GTTCACCGGT CAGAACTACG GCGACATCTT CACCGGGAGC
GCTAGCGGCC TGTTCCTGCC GTCGCTCCGC AACTCCTTCG GCATCTGCCT GATCGCGACG
TTCATCTCCT GTGTGCTGGC GATGTTCGCC GCCTACGCCA TCGCGCGGCT GGACTTCCCG
GGCAAGCGGG TCATCCTGAC GACCGCGCTC GCCGTGGCGA TCTTCCCGAT CATCTCGATC
GTCACGCCGC TGTTCAACGT GTGGCGGCAG ATCGGCCTGT ACGACACCTG GCCGGGGTTG
ATCCTCCCGT ACCTGTCGCT CACCCTGCCG ATCTCCATCT GGACGATGTC GGCCTTCTTC
CGGGAGATCC CCTGGGAGAT GGAGCAGGCT GCGCAGGTCG ACGGTGCGAC CACCTGGCAG
GCCTTCCGCA AGGTGATCGT CCCGCTGGCC GCCCCGGGCG TGTTCACCAC GGCGATCATC
GCGTTCTTCA TCGCCTGGAA CGACTTCCTG TACGGCATCT CCCTGACCTC GACCGAGGCG
GCGCGACCGG TCCCTGCTGC ACTCGGCCTG TTCTCCGGTG CCTCACAGTT CGAGGACCCG
ACCGGCGTCA CAGCCGCGGC CGCCGTGATC GTCACCATCC CGGTGATCGT CCTCGTGCTG
CTCTTCCAGC GGCGCATCGT CGCCGGTCTC ACCAACGGCG CGGTCAAGGG CTGA
|
|---|
| Protein sequence | MSRREKIWWL IGGLVLVFYC LFPIAWIVSL SFKAPSDLAN GGFLPTQFTG QNYGDIFTGS
ASGLFLPSLR NSFGICLIAT FISCVLAMFA AYAIARLDFP GKRVILTTAL AVAIFPIISI
VTPLFNVWRQ IGLYDTWPGL ILPYLSLTLP ISIWTMSAFF REIPWEMEQA AQVDGATTWQ
AFRKVIVPLA APGVFTTAII AFFIAWNDFL YGISLTSTEA ARPVPAALGL FSGASQFEDP
TGVTAAAAVI VTIPVIVLVL LFQRRIVAGL TNGAVKG
|
|---|
| |