| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0558 |
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| Symbol | |
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| ID | 4201630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 666517 |
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| End bp | 667398 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081440 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_695012 |
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| Protein GI | 110801129 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA CTAAAAAGAG AAAAAATGTA GGTTTAGATA CTGAGAACAA AACTAAAAAA
GTAATATCTA ATACATTATT AAGGATTATA TTAATAGCTG CAACTATTTT AGTTATAGTG
CCAATTATAT GGACAATAAT GTCTTCTTTT AAAACTACTA AAGAATTCTA TGCAAGTCCA
TGGGCCTTAC CAAAAAGTTT TGGGTTTGCT AACTATATGA CTGCATTTAC AGAAGCTAAC
ATGGGAGCTT ACTTCTTCAA CTCAATATTA GTTACTATAA TAGCTATGGT TTTATCCCTA
TGTTTAAGTG TACCAGCATC TTATGTTTTA GCTAGACAAA AGTTCTTTGG ATGTAGTTTT
ATAAAGAATC TATTTATGGC AGGATTATTT ATTCAACCAG TATATATTAT AGTACCTTTA
TTTACAATAT TAGAAAAAAT GAAACTGTTA AATAATTTAT TTGCATTAGC TCTTGTATAT
GCAGTGCTAA GCTTACCTTT CTCAATCTAT ATAATGAGTG GATTTATGAA GGGGATTGCA
AAGGATTATG AAGAGGCAGC AATGATAGAT GGATGTACTA ATCTTCAAAT ATTAACAAAG
ATAGTAGTTC CATTAGCTAA ACCAGGTATT ATAACTATAA TGATATTCAA CTTTATGAAT
TATTGGAATG AATATGCTAT GGCAATGACT TTCATAACAG ATGCAGATAA AAAGACATTA
CCAGTAGGGT TACAAAACTT AATGGAAGTT CAAAAGTTTG CAACTGACTG GGGAGCATTA
TTTGCAGGAT TAGTTATAGT AATGGTACCT ACAATGGTTA TATACTCACT AGTTCATAAG
AAGTTAACAG AAGGTGTTAA CATTGGTGGA GTTAAGGGCT AA
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| Protein sequence | MLETKKRKNV GLDTENKTKK VISNTLLRII LIAATILVIV PIIWTIMSSF KTTKEFYASP
WALPKSFGFA NYMTAFTEAN MGAYFFNSIL VTIIAMVLSL CLSVPASYVL ARQKFFGCSF
IKNLFMAGLF IQPVYIIVPL FTILEKMKLL NNLFALALVY AVLSLPFSIY IMSGFMKGIA
KDYEEAAMID GCTNLQILTK IVVPLAKPGI ITIMIFNFMN YWNEYAMAMT FITDADKKTL
PVGLQNLMEV QKFATDWGAL FAGLVIVMVP TMVIYSLVHK KLTEGVNIGG VKG
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