| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0542 |
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| Symbol | |
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| ID | 4205099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 642623 |
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| End bp | 643504 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565099 |
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| Product | transmembrane transport protein |
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| Protein accession | YP_697870 |
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| Protein GI | 110802011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA CTAAAAAGAA AAAAAATGTA GGTTTAGATA CTGAAAACAA AACTAAAAAA
GTAATATCTA ATACATTATT AAGGATTATA TTAATAGCTG CAACTATTTT AGTTATAGTA
CCAATTATAT GGACAATAAT GTCTTCTTTT AAAACTACTA AAGAATTCTA TGCAAGTCCA
TGGGCATTAC CAAAAAGTTT TGGGTTTGCT AACTATATGA CTGCATTTAC AGAAGCTAAC
ATGGGAGCTT ACTTCTTCAA CTCAATATTA GTTACTATAA TAGCTATGAT TTTATCTCTA
TGCTTAAGTG TACCAGCATC TTATGTTTTA GCTAGACAAA AATTCTTTGG ATGTAGTTTT
ATAAAGAATT TATTTATGGC AGGATTATTT ATCCAACCAG TATATATTAT AGTACCTTTA
TTTACAATAT TAGAAAAAAT GAAATTGTTA AATAATTTAT TTGCACTAGC TCTTGTATAT
GCAGTGCTAA GCTTACCTTT CTCAATCTAT ATAATGAGTG GATTTATGAA GGGGATTGCA
AAGGATTATG AAGAGGCAGC AATGATAGAT GGATGTACTA ATCTTCAAAT ATTAACAAAG
ATAGTAGTTC CATTAGCTAA ACCAGGTATT ATAACTATAA TGATATTCAA CTTTATGAAT
TATTGGAATG AATATGCTAT GGCAATGACT TTCATAACAG ATGCAGATAA AAAGACATTA
CCAGTAGGGT TACAAAACTT AATGGAAGTT CAAAAGTTTG CAACTGACTG GGGAGCATTA
TTTGCAGGAT TAGTTATAGT AATGGTACCT ACAATGGTTA TATACTCACT AGTTCATAAG
AAGTTAACAG AAGGTGTTAA CATTGGTGGA GTTAAGGGCT AA
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| Protein sequence | MLETKKKKNV GLDTENKTKK VISNTLLRII LIAATILVIV PIIWTIMSSF KTTKEFYASP
WALPKSFGFA NYMTAFTEAN MGAYFFNSIL VTIIAMILSL CLSVPASYVL ARQKFFGCSF
IKNLFMAGLF IQPVYIIVPL FTILEKMKLL NNLFALALVY AVLSLPFSIY IMSGFMKGIA
KDYEEAAMID GCTNLQILTK IVVPLAKPGI ITIMIFNFMN YWNEYAMAMT FITDADKKTL
PVGLQNLMEV QKFATDWGAL FAGLVIVMVP TMVIYSLVHK KLTEGVNIGG VKG
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