Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2960 |
Symbol | |
ID | 8133915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3340086 |
End bp | 3340934 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866243 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003018519 |
Protein GI | 253689329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3833] ABC-type maltose transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0179548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC ACAGCGTTAA ACGCCAGAAT TTTATCAAAC TCGGCCTGAG CTACCTGCTG CTGACGATAG TGGCCATCAT CATTATTTAT CCGCTGATCT GGACGGTGGG CGCGTCGTTG AATCCCGGCA GCAGCCTGCT CAACACCTCA ATCATTCCGG ATAACTTCTC CTTTATTCAC TATGAGGAGC TGTTTAACGG CCAGATTGAC TACGCCGCCT GGTACTGGAA TTCGATGAAA ATCAGCTTCC TGACCATGAT TCTGACGCTC ATCAGCGTCA GTTTCACCGC GTATTCGTTC TCTCGCTTCC GCTTTCGCGG CCGCCAGAAC GGGCTGATGC TGTTTCTGCT GTTGCAGATG ATCCCGCAGT TCTCCGCGCT GATCGCCATC TTCGTGCTGG CACAGATGCT GGGGCTGGTG AACAGCCATA TTGCGCTGGT GCTGGTTTAC GTCGGCGGCA TGATCCCGAT GAACACCTAT CTGATGAAAG GCTATCTCGA TGCTATTCCG AAGGATCTGG ATGAGTCCGC GCGTATGGAC GGCGCAGGCA ATTTCCGCAT CTTCATCGAG ATCATTATGC CGCTGTCCAA ACCGATCATC GCAGTGATTG CCCTGTTCTC GTTTACCGGT CCGCTGGGCG ATTTCATTCT CTCCAGCACC ATTCTGCGCA CGCCGGATCA GTACACGCTT CCCATCGGGC TGTACAACCT GGTCGCGCAG AAAATGGGGG CCAGCTACAC CACCTATGCC GCGGGAGCCG TGCTGATCGC GGTGCCGGTC GCCATTCTTT ATCTTTCATT GCAAAAGTAC TTTGTCTCCG GCCTGACATC AGGCGGAACC AAAGGGTAA
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Protein sequence | MKKHSVKRQN FIKLGLSYLL LTIVAIIIIY PLIWTVGASL NPGSSLLNTS IIPDNFSFIH YEELFNGQID YAAWYWNSMK ISFLTMILTL ISVSFTAYSF SRFRFRGRQN GLMLFLLLQM IPQFSALIAI FVLAQMLGLV NSHIALVLVY VGGMIPMNTY LMKGYLDAIP KDLDESARMD GAGNFRIFIE IIMPLSKPII AVIALFSFTG PLGDFILSST ILRTPDQYTL PIGLYNLVAQ KMGASYTTYA AGAVLIAVPV AILYLSLQKY FVSGLTSGGT KG
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