Gene PC1_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2960 
Symbol 
ID8133915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3340086 
End bp3340934 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content54% 
IMG OID644866243 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003018519 
Protein GI253689329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0179548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ACAGCGTTAA ACGCCAGAAT TTTATCAAAC TCGGCCTGAG CTACCTGCTG 
CTGACGATAG TGGCCATCAT CATTATTTAT CCGCTGATCT GGACGGTGGG CGCGTCGTTG
AATCCCGGCA GCAGCCTGCT CAACACCTCA ATCATTCCGG ATAACTTCTC CTTTATTCAC
TATGAGGAGC TGTTTAACGG CCAGATTGAC TACGCCGCCT GGTACTGGAA TTCGATGAAA
ATCAGCTTCC TGACCATGAT TCTGACGCTC ATCAGCGTCA GTTTCACCGC GTATTCGTTC
TCTCGCTTCC GCTTTCGCGG CCGCCAGAAC GGGCTGATGC TGTTTCTGCT GTTGCAGATG
ATCCCGCAGT TCTCCGCGCT GATCGCCATC TTCGTGCTGG CACAGATGCT GGGGCTGGTG
AACAGCCATA TTGCGCTGGT GCTGGTTTAC GTCGGCGGCA TGATCCCGAT GAACACCTAT
CTGATGAAAG GCTATCTCGA TGCTATTCCG AAGGATCTGG ATGAGTCCGC GCGTATGGAC
GGCGCAGGCA ATTTCCGCAT CTTCATCGAG ATCATTATGC CGCTGTCCAA ACCGATCATC
GCAGTGATTG CCCTGTTCTC GTTTACCGGT CCGCTGGGCG ATTTCATTCT CTCCAGCACC
ATTCTGCGCA CGCCGGATCA GTACACGCTT CCCATCGGGC TGTACAACCT GGTCGCGCAG
AAAATGGGGG CCAGCTACAC CACCTATGCC GCGGGAGCCG TGCTGATCGC GGTGCCGGTC
GCCATTCTTT ATCTTTCATT GCAAAAGTAC TTTGTCTCCG GCCTGACATC AGGCGGAACC
AAAGGGTAA
 
Protein sequence
MKKHSVKRQN FIKLGLSYLL LTIVAIIIIY PLIWTVGASL NPGSSLLNTS IIPDNFSFIH 
YEELFNGQID YAAWYWNSMK ISFLTMILTL ISVSFTAYSF SRFRFRGRQN GLMLFLLLQM
IPQFSALIAI FVLAQMLGLV NSHIALVLVY VGGMIPMNTY LMKGYLDAIP KDLDESARMD
GAGNFRIFIE IIMPLSKPII AVIALFSFTG PLGDFILSST ILRTPDQYTL PIGLYNLVAQ
KMGASYTTYA AGAVLIAVPV AILYLSLQKY FVSGLTSGGT KG