Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1319 |
Symbol | |
ID | 8529708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1438167 |
End bp | 1439015 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003258731 |
Protein GI | 261820625 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0499558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC ACAGCGTAAA ACGCCAGAAT TTTATCAAAC TCGGCCTGAC CTACCTGCTG CTGACGATTG TGGCCGTCAT CATTATTTAT CCACTGATCT GGACGGTAGG CGCGTCGCTT AATCCCGGTA GCAGCCTGCT CAACACCTCG ATCATCCCGG ATAACTTCTC CTTTATTCAC TATGAGGAGT TGTTTAACGG CCAGATTGAC TATGCCGCCT GGTACTGGAA CTCGATGAAA ATCAGCTTCC TGACCATGAT TTTGACGCTC GTCAGCGTCA GTTTCACCGC GTATTCCTTC TCTCGCTTCC GCTTTCGCGG CCGCCAGAAC GGGCTGATGC TGTTTCTGCT GTTGCAGATG ATCCCGCAGT TCTCCGCATT GATCGCCATT TTCGTACTGG CACAGATGCT GGGGCTGGTG AACAGCCATA TTGCGCTGGT GCTGGTTTAC GTCGGCGGCA TGATCCCGAT GAACACCTAT CTGATGAAAG GCTATCTGGA TGCCATTCCG AAAGATCTGG ACGAGTCCGC GCGTATGGAC GGCGCGGGCA ACTTCCGCAT CTTTATCGAG ATCATTATGC CGCTGTCCAA GCCGATCATC GCGGTGATCG CCCTGTTCTC GTTTACCGGT CCACTGGGTG ATTTCATTCT CTCCAGCACC ATCCTGCGCA CGCCGGATCA ATACACGTTA CCTATCGGGC TTTACAACCT GGTCGCGCAA AAGATGGGCG CTAGCTACAC CACCTACGCC GCAGGTGCCG TGCTGATCGC GGTACCGGTC GCCATTCTTT ATCTTTCATT GCAAAAGTAC TTTGTCTCCG GCCTGACGTC AGGCGGGACC AAAGGGTAA
|
Protein sequence | MKKHSVKRQN FIKLGLTYLL LTIVAVIIIY PLIWTVGASL NPGSSLLNTS IIPDNFSFIH YEELFNGQID YAAWYWNSMK ISFLTMILTL VSVSFTAYSF SRFRFRGRQN GLMLFLLLQM IPQFSALIAI FVLAQMLGLV NSHIALVLVY VGGMIPMNTY LMKGYLDAIP KDLDESARMD GAGNFRIFIE IIMPLSKPII AVIALFSFTG PLGDFILSST ILRTPDQYTL PIGLYNLVAQ KMGASYTTYA AGAVLIAVPV AILYLSLQKY FVSGLTSGGT KG
|
| |