More than 300 homologs were found in PanDaTox collection
for query gene RSP_3943 on replicon NC_007488
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007488  RSP_3943  ABC sugar transporter, inner membrane subunit  100 
 
 
281 aa  565  1e-160  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0114669  n/a   
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  91.81 
 
 
281 aa  524  1e-148  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  64.49 
 
 
278 aa  370  1e-101  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27720  ABC-type sugar transport system, permease component  47.53 
 
 
284 aa  233  2.0000000000000002e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  0.333543  n/a   
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
285 aa  190  2e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
281 aa  185  9e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4015  binding-protein-dependent transport systems inner membrane component  35.88 
 
 
278 aa  163  4.0000000000000004e-39  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
288 aa  162  8.000000000000001e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
280 aa  159  3e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
275 aa  159  4e-38  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
273 aa  159  4e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
303 aa  158  9e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
284 aa  158  9e-38  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
281 aa  158  1e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_013521  Sked_11560  carbohydrate ABC transporter membrane protein  34.75 
 
 
301 aa  158  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.626059  hitchhiker  0.00742077 
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
275 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  32.83 
 
 
294 aa  157  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_013205  Aaci_2458  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
281 aa  157  2e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.162326  n/a   
 
 
-
 
NC_013595  Sros_8234  maltose transport protein  32.95 
 
 
271 aa  154  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.367769  normal 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
294 aa  153  2.9999999999999998e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_013595  Sros_7705  sugar ABC transporter (permease)  34.36 
 
 
301 aa  153  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.675914 
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
293 aa  153  4e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_012850  Rleg_1868  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
282 aa  152  7e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766168 
 
 
-
 
NC_007963  Csal_2612  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
276 aa  151  8.999999999999999e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0558  ABC transporter, permease protein  29.41 
 
 
293 aa  151  1e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0542  transmembrane transport protein  29.04 
 
 
293 aa  151  1e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
279 aa  151  1e-35  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2948  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
282 aa  151  1e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
303 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
279 aa  150  2e-35  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
305 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
271 aa  150  2e-35  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
280 aa  150  2e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_013131  Caci_1939  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
314 aa  150  3e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0503026  normal  0.979613 
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
281 aa  149  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1687  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
282 aa  149  4e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.437147  normal 
 
 
-
 
NC_013172  Bfae_29030  carbohydrate ABC transporter membrane protein  30.26 
 
 
275 aa  149  5e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  32.54 
 
 
297 aa  149  5e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
272 aa  149  5e-35  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  34.96 
 
 
272 aa  149  5e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
306 aa  148  9e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
283 aa  148  1.0000000000000001e-34  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
276 aa  147  1.0000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  35.09 
 
 
273 aa  147  1.0000000000000001e-34  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
275 aa  147  2.0000000000000003e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  29.96 
 
 
303 aa  147  2.0000000000000003e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1015  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
280 aa  147  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1093  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
270 aa  146  3e-34  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2717  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
276 aa  146  4.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.621344  normal  0.190746 
 
 
-
 
NC_013526  Tter_2657  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
283 aa  145  9e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0396  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
722 aa  145  9e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0626826  n/a   
 
 
-
 
NC_010498  EcSMS35_1810  putative sugar ABC transporter, permease protein  36.05 
 
 
280 aa  145  1e-33  Escherichia coli SMS-3-5  Bacteria  normal  0.817708  normal 
 
 
-
 
NC_012034  Athe_2374  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
285 aa  144  1e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
285 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2253  sugar ABC transporter (permease)  33.21 
 
 
281 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal  0.273878 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  34.08 
 
 
286 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
275 aa  143  3e-33  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  31.92 
 
 
271 aa  142  4e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
295 aa  143  4e-33  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_009636  Smed_2144  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
288 aa  142  4e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0628  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
280 aa  142  5e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00114056  n/a   
 
 
-
 
NC_008146  Mmcs_4355  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
289 aa  142  6e-33  Mycobacterium sp. MCS  Bacteria  normal  0.023138  n/a   
 
 
-
 
NC_008705  Mkms_4441  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
289 aa  142  6e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0617645 
 
 
-
 
NC_009077  Mjls_4735  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
289 aa  142  6e-33  Mycobacterium sp. JLS  Bacteria  normal  0.820737  normal 
 
 
-
 
NC_013595  Sros_5530  sugar ABC transporter (permease)  32.38 
 
 
292 aa  142  9e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.30156 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
300 aa  142  9e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0439  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
279 aa  141  9.999999999999999e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0806983  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  29.09 
 
 
277 aa  141  9.999999999999999e-33  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
277 aa  141  9.999999999999999e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
277 aa  141  9.999999999999999e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
281 aa  141  9.999999999999999e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
277 aa  141  9.999999999999999e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
277 aa  141  9.999999999999999e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
279 aa  140  1.9999999999999998e-32  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1989  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
284 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.951557  n/a   
 
 
-
 
NC_011353  ECH74115_1957  putative sugar ABC transporter, permease protein  36.05 
 
 
280 aa  140  1.9999999999999998e-32  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.605299  normal  0.820662 
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
301 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3428  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
280 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
281 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_009953  Sare_3205  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
319 aa  140  1.9999999999999998e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.450418 
 
 
-
 
NC_007948  Bpro_3817  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
283 aa  140  3e-32  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2981  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
319 aa  140  3e-32  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0908171 
 
 
-
 
NC_009429  Rsph17025_3582  hypothetical protein  31.84 
 
 
278 aa  140  3e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.928396  normal  0.804079 
 
 
-
 
NC_009616  Tmel_0820  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
269 aa  140  3e-32  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  32.25 
 
 
293 aa  140  3e-32  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
276 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_012792  Vapar_6267  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
296 aa  139  3.9999999999999997e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
276 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
282 aa  139  3.9999999999999997e-32  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
309 aa  139  3.9999999999999997e-32  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_013202  Hmuk_0942  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
280 aa  139  4.999999999999999e-32  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.41482 
 
 
-
 
NC_012669  Bcav_0791  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
308 aa  139  4.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.013285 
 
 
-
 
NC_013159  Svir_16640  ABC-type sugar transport system, permease component  33.08 
 
 
266 aa  139  6e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.961926  normal 
 
 
-
 
NC_011886  Achl_3073  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
315 aa  138  7.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009436  Ent638_2162  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
280 aa  138  7.999999999999999e-32  Enterobacter sp. 638  Bacteria  normal  normal  0.250115 
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
275 aa  138  7.999999999999999e-32  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0750  sugar ABC transporter, permease protein, putative  31.82 
 
 
275 aa  138  8.999999999999999e-32  Brucella suis 1330  Bacteria  normal  0.688885  n/a   
 
 
-
 
NC_011886  Achl_3122  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
305 aa  138  8.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.290341 
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  32.58 
 
 
282 aa  138  8.999999999999999e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0017  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
300 aa  138  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.385749  normal 
 
 
-
 
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