Gene Bfae_27720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_27720 
Symbol 
ID8401316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp3103982 
End bp3104836 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID644998808 
ProductABC-type sugar transport system, permease component 
Protein accessionYP_003156128 
Protein GI257069873 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.333543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGGC GCCGTCACGC AAGCCCGCAC GTCTCCCCTT TGGGGCGAAC ACTGCGCTTT 
GCAGTGTGGG CGGTACTCAT CCTGATGGCG ATCGGTGTGC TGTACCCGTT GTTCTGGATG 
GTCTCGTCCT CCTTCAAAAC GAGCTCGGAG ATCTTCTCGG ACCCTTGGGC GCTTCCGACG 
TCGCTGTCCG TCGAGAGCTT TTTGACCGCC TGGAGCCAGG GAGTCTTCGG ATACTTCCTG 
AACTCGACGA TCATCACCGT CGTATCCCTC GTGCTGGTCC TCCTGCTGAG CACGGCGGCG 
GCTTTCGCGC TCACCAAGCT GCGACTTCCG TTCGCCGGAT TGATCAGCCT GCTCATCCTG 
GGCGGTCTGA TGGTTTCGCC CACGATGATT CTTGTCCCCG TCTTCCAGCT GATGATCGCC 
CTGCACCTGC ACGACACCCT GATCGGCTTG ATCCTCGTGT ACGTCGCCTA CCGACTGCCA 
TTCACGATCT TCCTCATCCG TGCCTACATG CTGACCCTCC CGAACGAAGT CATCGAGGCC 
TCAATGATCG ATGGGGCCTC GTTGATGCAG ACGTTCTCGC GCATAGTCAT ACCTCTGTGC 
AAGCCCGTAC TCGTCAGCGC CGGGTTGGTG TACGTCCTGT TCGCCTGGAA CGAGTTTCCC 
TTCGCGCTTA TCTTGCTGAA CGATCCGACT CTGAAGACGC TTCCCGTCGG CTTGTTGGAC 
TTCAAGAGCG CGCTGCAGAC GGACTGGTCC GTGCTCTTCG CAGGGCTGAC ACTCGCCGCC 
GTCCCCATGA TTGCCCTGTT CGTCGCCTCA CAGCGCGCCT TTGTGCGTGG CCTAGCCGAT 
GGAATGGGCA AGTAA
 
Protein sequence
MPRRRHASPH VSPLGRTLRF AVWAVLILMA IGVLYPLFWM VSSSFKTSSE IFSDPWALPT 
SLSVESFLTA WSQGVFGYFL NSTIITVVSL VLVLLLSTAA AFALTKLRLP FAGLISLLIL 
GGLMVSPTMI LVPVFQLMIA LHLHDTLIGL ILVYVAYRLP FTIFLIRAYM LTLPNEVIEA 
SMIDGASLMQ TFSRIVIPLC KPVLVSAGLV YVLFAWNEFP FALILLNDPT LKTLPVGLLD 
FKSALQTDWS VLFAGLTLAA VPMIALFVAS QRAFVRGLAD GMGK