| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1524 |
|---|
| Symbol | |
|---|
| ID | 7859680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1746086 |
|---|
| End bp | 1746982 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643865609 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002881542 |
|---|
| Protein GI | 229820016 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG CGACCCTTCC CTCTCGTAGC ACCTCGCCGT CGCGCCCGGC GGGGCCGTTC
CGCGCCGGTC GCGCGCGGGC GACGACGGCG ACACGCACGC TGGTGACGTG GTTCGCCCTG
GCCGCGGCGT CCGCCGTCGT GCTCCTGCCG CTCGCATGGA TGCTGAGCGC TTCGCTGCGC
ACGCAGGGCG ACCTCGTGGG CAGTCCGTCG TCGCTCATCC CGACGAACGT CACGTTCGAG
AACTACGTCG AGATCTGGCA GCTCATCCCG TTCGGGCGGC TGTTCCTCAA CACCGTCGTG
TTCGCCGGGG TGGTGGCGTG CGTCTCCGTG GTGATCGACG CGATGGCGGG CTACGCGCTC
GCGCGGTTCG ACTTCCCGGG CCGGACGTTC GTGTTCGTGG CGCTCGTCGC CACGCTGCTC
GTCCCGATCC AGGTGACGTT CGTGCCGGTG TACTCGTTGT TGATCGACCT CGGGTGGGTG
AACACCCTGC ACGGGTTGAT CGTGCCCCGG ATCGCCGACG CGTTCGGGAT CTTCTTCCTC
CGGCAGTACT TCCTCGCCCT GCCGAAGGAC CTCGAGGACG CCGCCCGGAT CGACGGCGCC
TCGGAGGTGC GGATCTTCCG GTCGATCATG TTCCCGCTCG CCGGCCCGGC GCTGCTGACG
ATCTTCATGT TCAACCTGGT CGGCAACTGG AACGACCTGC TGTGGCCGCT CATCGTCATG
AGCGACCCGC AGTCGACGAC CCTGCCCGTG GGCCTGGCGC TGTTCCGCGG TCAGCACGTC
ATCGAGTACG GGCCGCTCAT GGCCGGGTCG GTGCTCGCGC TCATCCCGAT GGTGATCGCG
TTCGTCGTCG TGCAGCGACG GTTCATCGAA AGCATCGCAA CGACCGGGAT CAAGTAG
|
|---|
| Protein sequence | MTTATLPSRS TSPSRPAGPF RAGRARATTA TRTLVTWFAL AAASAVVLLP LAWMLSASLR
TQGDLVGSPS SLIPTNVTFE NYVEIWQLIP FGRLFLNTVV FAGVVACVSV VIDAMAGYAL
ARFDFPGRTF VFVALVATLL VPIQVTFVPV YSLLIDLGWV NTLHGLIVPR IADAFGIFFL
RQYFLALPKD LEDAARIDGA SEVRIFRSIM FPLAGPALLT IFMFNLVGNW NDLLWPLIVM
SDPQSTTLPV GLALFRGQHV IEYGPLMAGS VLALIPMVIA FVVVQRRFIE SIATTGIK
|
|---|
| |