Gene Caci_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2678 
Symbol 
ID8334027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3071641 
End bp3072510 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID644955829 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003113435 
Protein GI256391871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CCGTCAAGCA CCGCTCGCCG ACAGCACCGC CCCGGTCCTT CATCTGGACC 
CGGCGCATCG CGCTGACACT GCTCGGACTG TTCACCGGCA TCCCGCTGTG GGTGATGGTG
TCCAGCTCCG TGAAATCGCT GGTCGAGGTC CAGAACGCGT TCCACTGGCT GCCCACACAC
CTGACGCTCA GCCCCTACAT CGACATGTGG AGCACCGTCC CGCTCGGGCA CTACTTCCTC
AACAGCGCCA TCGTCGCCTC CTGCTCGACG GCGGTCTCGG TGGTGATCGC CGTCTTCGCG
GCCTACGCCG TGTCCCGCTA CCGGTTCGCC GGCCGCAAGG TCTTCTCCGT CACGGTGTTG
TCCACGCAGA TGTTCCCCGG CATCCTGTTC CTGCTCCCGC TCTACCTCAT CTTCGTGAAC
ATCGGGAACA GCACCGGGAT CCAGCTCTCC GACACCCGGC TCGGCCTCAT CATCACCTTC
CTGACCTTCA CCCTGCCGTT CTCCATCTGG ATGCTGGTCG GGTACTTCGA CTCCATCCCC
CGGGACCTGG ACGAGGCCGC CTCCGTCGAC GGATCCGGCC CGATCAGCAC CCTGTTCAAG
ATCCTCGTCC CGGCAGCCCT CCCCGGCATC GTCACCGTCG CGGTGTACTC CTTCATGACA
GCCTGGGGCG AAGTGCTGTT CGCATCAGTG ATGACCGACG ACTCCACCCG CACCCTGGCC
GTGGGCCTGC GCGACTACGC CTCGCAGAAC GACGTCTACT GGAACCAGAT CATGGCGGCG
TCCCTGGTCG TCAGCATCCC GGTGGTCGCC GGATTCCTGC TCATGCAGAA GTACCTCATC
GCCGGGCTGA CCGCCGGCGC GGTCAAGTAG
 
Protein sequence
MSDAVKHRSP TAPPRSFIWT RRIALTLLGL FTGIPLWVMV SSSVKSLVEV QNAFHWLPTH 
LTLSPYIDMW STVPLGHYFL NSAIVASCST AVSVVIAVFA AYAVSRYRFA GRKVFSVTVL
STQMFPGILF LLPLYLIFVN IGNSTGIQLS DTRLGLIITF LTFTLPFSIW MLVGYFDSIP
RDLDEAASVD GSGPISTLFK ILVPAALPGI VTVAVYSFMT AWGEVLFASV MTDDSTRTLA
VGLRDYASQN DVYWNQIMAA SLVVSIPVVA GFLLMQKYLI AGLTAGAVK