Gene RSP_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3943 
SymbolyurM 
ID3712060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp108526 
End bp109371 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content66% 
IMG OID640069395 
ProductABC sugar transporter, inner membrane subunit 
Protein accessionYP_345262 
Protein GI77404688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0114669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG CGACCCACTC CGCCCGCGGC TTCTGGCCCG TGATGGGGCA GGCCTTCCTC 
TGGGCCTTCC TCCTCGCCGT GGGCGTCGTC GTGCTTTATC CGCTGCTCTG GATGGGGCTC
GGCGGCTTCA AGTCGAACAG CCAGATCTTC GACCAGCCCT TCGCCCTGCC GCAGGACTGG
TCGCTCGAGA ACTACTTCTC GGCCTGGCGC GGGGTGCAGG GCTACATGGT CTCGAGCCTC
CTCGTCACGC TGGTCTCGAC GGTGGCGACC GTGCTGATCT CGGCGCGCGC GGCCTATGGG
CTCACGCGGA CGGCGATGCC GGCAAAGCCC CTCATCACCG CCTTCGTCCT CGGCGGCATG
ATGCTGAGCC CGACCGTCGC CCTCGTGCCG CTGGTGCGGA TGCTCCAGTC GCTCGGGCTC
TACGACACGC ACTGGGCGCT CATCATCCTC TACACCGCCT TCCGCGTGCC CTTCACCACC
TTCCTGATCC GCGCCTACAT GCTCGACCTG CCGCGCGACC TCGACGAGGC CGCCATGATG
GACGGCGCAA GCCCCGGCCA GATCTACCGC AGGATCATCC TGCCGCTCTG CCGGCCGATC
GTCGTCTCCT GCGTCGTGCT CCATATCCTC TTTGCCTGGA ACGAATATCT CTTCGCCATG
ATCTTCACCA ACAGTCCCGG CGTGCAGACG CTGCCCGTGG GCCTCACCTC GCTGATGTCG
AAGCAGGGCA CCGACTTCGC GCAGGTCTTC GCCGCCATGA CGCTCTCGGC GCTGCCCATC
GTCATCATCT TCTTCCTGAC CCAGCGATAC TTCATCCGCG GCCTGACCGA AGGGATGGCG
AAATGA
 
Protein sequence
MSGATHSARG FWPVMGQAFL WAFLLAVGVV VLYPLLWMGL GGFKSNSQIF DQPFALPQDW 
SLENYFSAWR GVQGYMVSSL LVTLVSTVAT VLISARAAYG LTRTAMPAKP LITAFVLGGM
MLSPTVALVP LVRMLQSLGL YDTHWALIIL YTAFRVPFTT FLIRAYMLDL PRDLDEAAMM
DGASPGQIYR RIILPLCRPI VVSCVVLHIL FAWNEYLFAM IFTNSPGVQT LPVGLTSLMS
KQGTDFAQVF AAMTLSALPI VIIFFLTQRY FIRGLTEGMA K