More than 300 homologs were found in PanDaTox collection
for query gene CPS_0824 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0824  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
255 aa  524  1e-148  Colwellia psychrerythraea 34H  Bacteria  normal  0.394944  n/a   
 
 
-
 
NC_010506  Swoo_1496  short-chain dehydrogenase/reductase SDR  67.06 
 
 
255 aa  371  1e-102  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1363  short chain dehydrogenase/reductase family oxidoreductase  66.92 
 
 
263 aa  359  2e-98  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3600  short-chain dehydrogenase/reductase SDR  63.14 
 
 
255 aa  332  5e-90  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000312486  n/a   
 
 
-
 
NC_009052  Sbal_3480  short-chain dehydrogenase/reductase SDR  60.38 
 
 
260 aa  319  3e-86  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0859  short-chain dehydrogenase/reductase SDR  60 
 
 
260 aa  318  3.9999999999999996e-86  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0882  short-chain dehydrogenase/reductase SDR  60 
 
 
260 aa  318  7e-86  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0894  short-chain dehydrogenase/reductase SDR  59.23 
 
 
260 aa  312  2.9999999999999996e-84  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5965  short-chain dehydrogenase/reductase SDR  60.89 
 
 
250 aa  308  5e-83  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.443482  normal 
 
 
-
 
NC_006368  lpp2080  hypothetical protein  60.87 
 
 
254 aa  300  1e-80  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2070  hypothetical protein  61.11 
 
 
254 aa  300  2e-80  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_1384  short-chain dehydrogenase/reductase SDR  58.23 
 
 
257 aa  291  1e-77  Acidovorax sp. JS42  Bacteria  normal  0.981738  normal 
 
 
-
 
NC_010557  BamMC406_6155  short-chain dehydrogenase/reductase SDR  57.03 
 
 
257 aa  290  2e-77  Burkholderia ambifaria MC40-6  Bacteria  normal  0.30491  normal 
 
 
-
 
NC_008392  Bamb_6448  short-chain dehydrogenase/reductase SDR  57.03 
 
 
257 aa  290  2e-77  Burkholderia ambifaria AMMD  Bacteria  normal  0.429705  normal 
 
 
-
 
NC_009784  VIBHAR_07016  oxidoreductase  54.9 
 
 
256 aa  282  3.0000000000000004e-75  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3846  short-chain dehydrogenase/reductase SDR  53.41 
 
 
254 aa  273  2.0000000000000002e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4263  oxidoreductase, short chain dehydrogenase/reductase family  48.44 
 
 
257 aa  253  2.0000000000000002e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3420  short-chain dehydrogenase/reductase SDR  51.2 
 
 
256 aa  251  6e-66  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0826034  normal 
 
 
-
 
NC_010515  Bcenmc03_4431  short-chain dehydrogenase/reductase SDR  50.58 
 
 
256 aa  251  8.000000000000001e-66  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.523417  normal 
 
 
-
 
NC_008061  Bcen_4894  short-chain dehydrogenase/reductase SDR  50.58 
 
 
256 aa  249  3e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3269  short-chain dehydrogenase/reductase SDR  50.58 
 
 
256 aa  249  3e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.210768 
 
 
-
 
NC_008545  Bcen2424_6913  short-chain dehydrogenase/reductase SDR  50.58 
 
 
256 aa  249  3e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1982  short-chain dehydrogenase/reductase SDR  48.41 
 
 
264 aa  243  1.9999999999999999e-63  Burkholderia ambifaria AMMD  Bacteria  normal  0.473895  n/a   
 
 
-
 
NC_008545  Bcen2424_6863  short-chain dehydrogenase/reductase SDR  48.81 
 
 
261 aa  238  5e-62  Burkholderia cenocepacia HI2424  Bacteria  normal  0.224503  n/a   
 
 
-
 
NC_009656  PSPA7_0908  3-oxoacyl-(acyl-carrier-protein) reductase  43.75 
 
 
257 aa  216  2.9999999999999998e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.117831  n/a   
 
 
-
 
NC_011887  Mnod_7850  short-chain dehydrogenase/reductase SDR  44.92 
 
 
256 aa  204  1e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0680  short-chain dehydrogenase/reductase SDR  45.98 
 
 
255 aa  203  2e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0185948  normal 
 
 
-
 
NC_009832  Spro_4682  short-chain dehydrogenase/reductase SDR  36.59 
 
 
253 aa  162  6e-39  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  36.63 
 
 
269 aa  141  9e-33  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  35.29 
 
 
262 aa  132  6.999999999999999e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2623  short-chain dehydrogenase/reductase SDR  34.27 
 
 
284 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.795257  n/a   
 
 
-
 
NC_008705  Mkms_2667  short-chain dehydrogenase/reductase SDR  34.27 
 
 
284 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  0.459641  normal  0.940814 
 
 
-
 
NC_009077  Mjls_2652  short-chain dehydrogenase/reductase SDR  34.27 
 
 
284 aa  130  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  0.690053  normal 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  32.68 
 
 
247 aa  128  1.0000000000000001e-28  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_012858  Rleg_6829  short-chain dehydrogenase/reductase SDR  31.76 
 
 
237 aa  128  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.138862 
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  32.26 
 
 
249 aa  127  2.0000000000000002e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1303  short-chain dehydrogenase/reductase SDR  31.73 
 
 
258 aa  127  2.0000000000000002e-28  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  32.4 
 
 
250 aa  127  2.0000000000000002e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5682  short-chain dehydrogenase/reductase SDR  35.51 
 
 
239 aa  126  3e-28  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  33.47 
 
 
246 aa  125  5e-28  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  34.96 
 
 
247 aa  125  7e-28  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  33.86 
 
 
248 aa  125  7e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  33.07 
 
 
263 aa  124  1e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1531  3-oxoacyl-[acyl-carrier-protein] reductase  31.85 
 
 
249 aa  124  1e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.356437 
 
 
-
 
NC_009441  Fjoh_1994  short-chain dehydrogenase/reductase SDR  31.97 
 
 
245 aa  124  1e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  35.02 
 
 
258 aa  124  1e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2052  short-chain dehydrogenase/reductase SDR  31.02 
 
 
248 aa  124  2e-27  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1599  short-chain dehydrogenase/reductase SDR  33.47 
 
 
252 aa  124  2e-27  Dickeya dadantii Ech703  Bacteria  normal  0.166139  n/a   
 
 
-
 
NC_013411  GYMC61_2516  short-chain dehydrogenase/reductase SDR  35.6 
 
 
256 aa  124  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  33.2 
 
 
249 aa  124  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3338  tropinone reductase  31.17 
 
 
267 aa  123  3e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0617958 
 
 
-
 
NC_009338  Mflv_2071  short-chain dehydrogenase/reductase SDR  33.33 
 
 
258 aa  123  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.70228  normal  0.023925 
 
 
-
 
NC_010085  Nmar_0634  short-chain dehydrogenase/reductase SDR  32.53 
 
 
253 aa  123  3e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009512  Pput_1844  short-chain dehydrogenase/reductase SDR  32.28 
 
 
255 aa  123  3e-27  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.0017919 
 
 
-
 
NC_012791  Vapar_0079  short-chain dehydrogenase/reductase SDR  30 
 
 
246 aa  122  4e-27  Variovorax paradoxus S110  Bacteria  normal  0.596846  n/a   
 
 
-
 
NC_009620  Smed_3913  short-chain dehydrogenase/reductase SDR  32.54 
 
 
237 aa  122  8e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2434  short-chain dehydrogenase/reductase SDR  32.94 
 
 
252 aa  121  9e-27  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000391653  normal  0.106705 
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  33.46 
 
 
252 aa  121  9.999999999999999e-27  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011681  PHATRDRAFT_21608  predicted protein  32.17 
 
 
276 aa  120  9.999999999999999e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  32.13 
 
 
249 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_2090  short-chain dehydrogenase/reductase SDR  32.79 
 
 
249 aa  121  9.999999999999999e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.120513 
 
 
-
 
NC_011757  Mchl_2365  short-chain dehydrogenase/reductase SDR  33.06 
 
 
249 aa  121  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0450975 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  32.68 
 
 
263 aa  121  9.999999999999999e-27  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_007974  Rmet_4614  short-chain dehydrogenase/reductase SDR  32.1 
 
 
250 aa  120  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5464  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  35.34 
 
 
253 aa  120  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.852927  n/a   
 
 
-
 
NC_011988  Avi_6105  short-chain dehydrogenase/reductase  33.47 
 
 
265 aa  120  3e-26  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_008262  CPR_0392  2-deoxy-D-gluconate 3-dehydrogenase  34.12 
 
 
258 aa  120  3e-26  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4933  short-chain dehydrogenase/reductase SDR  34 
 
 
249 aa  120  3e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.504822  normal 
 
 
-
 
NC_010524  Lcho_2375  short-chain dehydrogenase/reductase SDR  32.8 
 
 
265 aa  119  3.9999999999999996e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_2090  short-chain dehydrogenase/reductase SDR  33.47 
 
 
237 aa  119  3.9999999999999996e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2700  short-chain dehydrogenase/reductase SDR  33.2 
 
 
268 aa  119  4.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.657901 
 
 
-
 
NC_013595  Sros_4258  short-chain dehydrogenase/reductase SDR  32.39 
 
 
253 aa  119  4.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  0.414505 
 
 
-
 
NC_008699  Noca_1834  short-chain dehydrogenase/reductase SDR  31.89 
 
 
257 aa  119  4.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0118  2-deoxy-D-gluconate 3-dehydrogenase  33.33 
 
 
256 aa  119  7e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_0404  short-chain dehydrogenase/reductase SDR  31.3 
 
 
249 aa  118  7e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0751362 
 
 
-
 
NC_007335  PMN2A_1785  3-oxoacyl-[acyl-carrier-protein] reductase  33.47 
 
 
250 aa  118  7.999999999999999e-26  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  32.4 
 
 
258 aa  118  9e-26  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_002947  PP_2503  3-oxoacyl-(acyl-carrier-protein) reductase, putative  29.67 
 
 
243 aa  118  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_05081  3-oxoacyl-[acyl-carrier protein] reductase  33.47 
 
 
250 aa  117  9.999999999999999e-26  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.162194 
 
 
-
 
NC_011369  Rleg2_1783  short-chain dehydrogenase/reductase SDR  35.06 
 
 
247 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0185042  normal  0.0937687 
 
 
-
 
NC_008148  Rxyl_3007  short-chain dehydrogenase/reductase SDR  29.8 
 
 
252 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.22334  n/a   
 
 
-
 
NC_008254  Meso_3782  short-chain dehydrogenase/reductase SDR  33.2 
 
 
258 aa  117  9.999999999999999e-26  Chelativorans sp. BNC1  Bacteria  normal  0.143319  n/a   
 
 
-
 
NC_013132  Cpin_4576  short-chain dehydrogenase/reductase SDR  31.17 
 
 
244 aa  117  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.202963  normal 
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  33.59 
 
 
256 aa  118  9.999999999999999e-26  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4381  short-chain dehydrogenase/reductase SDR  32.42 
 
 
254 aa  118  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5518  short-chain dehydrogenase/reductase SDR  32.94 
 
 
260 aa  118  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000468902  normal  0.0104317 
 
 
-
 
NC_007348  Reut_B5126  Short-chain dehydrogenase/reductase SDR  31.1 
 
 
236 aa  117  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3595  tropinone reductase  31.85 
 
 
258 aa  117  1.9999999999999998e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.855153  normal 
 
 
-
 
NC_009621  Smed_5843  short-chain dehydrogenase/reductase SDR  32.14 
 
 
261 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.861263  normal 
 
 
-
 
NC_009441  Fjoh_3994  short-chain dehydrogenase/reductase SDR  31.17 
 
 
244 aa  117  1.9999999999999998e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1136  short-chain dehydrogenase/reductase SDR  32.79 
 
 
249 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.399133  n/a   
 
 
-
 
NC_008261  CPF_0396  2-deoxy-D-gluconate 3-dehydrogenase  33.73 
 
 
258 aa  117  1.9999999999999998e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6220  short-chain dehydrogenase/reductase SDR  30.77 
 
 
252 aa  117  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.621886  normal 
 
 
-
 
NC_009656  PSPA7_3225  bacilysin biosynthesis oxidoreductase BacC  30.61 
 
 
242 aa  117  1.9999999999999998e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0716  short-chain dehydrogenase/reductase SDR  33.33 
 
 
249 aa  117  1.9999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  31.6 
 
 
264 aa  116  3e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  32.68 
 
 
248 aa  116  3e-25  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_008261  CPF_1154  7-alpha-hydroxysteroid dehydrogenase  29.32 
 
 
253 aa  116  3e-25  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000294561  n/a   
 
 
-
 
NC_012791  Vapar_3308  short-chain dehydrogenase/reductase SDR  31.84 
 
 
249 aa  117  3e-25  Variovorax paradoxus S110  Bacteria  normal  0.616941  n/a   
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  30.04 
 
 
269 aa  116  3e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
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