| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1834 |
|---|
| Symbol | |
|---|
| ID | 4597672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1955309 |
|---|
| End bp | 1956082 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639776433 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_923032 |
|---|
| Protein GI | 119716067 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC TCTTCGACCT CACCGGCAAG ACCGCGCTCG TCACCGGCGG CGGCCGCGGC
ATCGGCCGGA TGGCCGCGCG CGGCCTCCTC CAGGCAGGCG CGACCGTGAT CATCGCCAGC
CGCAAGCTCG CCGACTGCGA GCAGACCGCG GCCGAACTGG CCGACCTCGG CCGGGTCGTC
CCCCTGGCGG CGGACCTGTC CACCCAGGAG GGCTGCCGCG AACTGGCCGC CGCGGTCGCC
GAGCACACCG ACGCTCTGCA CGTGCTGGTC AACAACGCCG GCGCGGTCTG GGGCGCTCCG
TTCGCGGAGT TCCCGGCCAG CGGCTGGGAC AAGGTCCTCG ACCTGAACCT GAAGGGCCCC
TTCTACCTGA CCCAGGAGCT GATCGGCCTG CTGCGCGCGG CAGCCACGGA CGGCGACCCG
GCGCGCGTCG TGAACATCGG CTCGATCGAC GGGCTCCGGG TCCCGGCGCT GCCGAACTTC
TCCTACTCCG CGGCCAAGGC GGGCCTGCAC CACCTCACCC GGGTGCTGGC CGTCGAGCTC
GGCCCGGACC TCACCGTGAA CGCGATCGCG CCGGGTCCCT TCGCCTCCAA GATGATGGCG
GCCACGCTCG AGAAGGAGAA GGAGACGTTT GAGGAGGTGG CACCCATGGG GCGCATCGGC
GCCGACGACG ACATCGCCGG CGCAATCGTC TACCTGGCTG CGCGGGCCTC GGCGTACGTG
ACCGGCGTGG TGCTACCCGT TGACGGCGGC ATCTCGGTCG CGTCCGTCAT CTGA
|
|---|
| Protein sequence | MNPLFDLTGK TALVTGGGRG IGRMAARGLL QAGATVIIAS RKLADCEQTA AELADLGRVV
PLAADLSTQE GCRELAAAVA EHTDALHVLV NNAGAVWGAP FAEFPASGWD KVLDLNLKGP
FYLTQELIGL LRAAATDGDP ARVVNIGSID GLRVPALPNF SYSAAKAGLH HLTRVLAVEL
GPDLTVNAIA PGPFASKMMA ATLEKEKETF EEVAPMGRIG ADDDIAGAIV YLAARASAYV
TGVVLPVDGG ISVASVI
|
|---|
| |