Gene PHATRDRAFT_21608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21608 
Symbol 
ID7202454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp586688 
End bp587578 
Gene Length891 bp 
Protein Length276 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181759 
Protein GI219122868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCAATGTAAA TTTTTGTGCA TCTGCCTATC ATGCAGGACA ATATCATAAA GGAGTCCGAG 
CGTATTTTAC AGAGCTGGAC TCTACAGGGG CGAAATTATT TAGTTACGGG TGGCGCGAAA
GGCATCGGTC TCGCCACTGT CAAAGCCTTG CTCGCGCATG GGGCCAAGAC GGTTCTGTTC
TGCTCACGGG GATTTTGCCT GGACCTTGTT ACGTCTCTGC AAGAAGCGTA CCCACAGTCG
TCTATTGTTC ATATTTCATG CGACGTATCG ACCTCAGACG GACGTGAAAA TCTTATAAAG
GCGGTCGGGG AGCATGTGAT GAATTTGCAC GGCCTCGTCA ACAACGTCGG TCTGAACGTT
CGAAAGCCTA TAACAGAACA AACAACAGAA GAATATCAAA GTATGATGCG TACAAATGTC
GACTCGGCGT ATTTTTTGTC CAAGGCTTGC TTGCCATTGT TTGATCCAAT CGGTGCCACG
ATTGTGAACA TATCGTCTGC GGCCGGGGTA CAGAGTTCGG GCACTGGAAT CGTTTACGCC
ATGTCTAAGG CCGCGCTCAA CCAGTTCACC AGGACGCTTG CCTGCGAGTG GGCTTCCCGA
AATATTCGAG TTAATGCGGT TACACCGTGG ATGACCATGA CACCAATGCT AGAAGAAGCC
GTGCAAAAGA ATCCCACGCA ACTCGACAAA GTAAAAGAAT GGACTCCATT ACATCGTTTG
GGGCGAGCTG ACGAGATCGC TAACCCTATC GCATTTCTCT GCATGCCCGC TTCGAGCTAC
ATCACTGGAC AGATCCTTGG TGTGGATGGT GGCTTGACTG CGCAAGGTTT TGACGGGCCG
TGCGTAACTC CCGAAGACTA GAAAGGGTCA GAGTCGTAGA CGAATGTAAA C
 
Protein sequence
MQDNIIKESE RILQSWTLQG RNYLVTGGAK GIGLATVKAL LAHGAKTVLF CSRGFCLDLV 
TSLQEAYPQS SIVHISCDVS TSDGRENLIK AVGEHVMNLH GLVNNVGLNV RKPITEQTTE
EYQSMMRTNV DSAYFLSKAC LPLFDPIGAT IVNISSAAGV QSSGTGIVYA MSKAALNQFT
RTLACEWASR NIRVNAVTPW MTMTPMLEEA VQKNPTQLDK VKEWTPLHRL GRADEIANPI
AFLCMPASSY ITGQILGVDG GLTAQGFDGP CVTPED