| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4576 |
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| Symbol | |
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| ID | 8360749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5719952 |
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| End bp | 5720686 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966731 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124219 |
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| Protein GI | 256423566 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.202963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AAACAGTGAT TGTAACCGGC GCTTCCTCAG GTATAGGTAA AGAAGTAGCG
CGTTACTTTT TAGATAAAGG CGATAATGTG GTCATCAACT CCTCCACCGC CGAAAAACTG
GAACAGGTAT ATCAGGAGCT GGGCGCAGGT ACAAATCTGG CCATGGTAGC TGGTAACGTA
AAAGATAAAA GTACCGGTGA ACGCCTGCTG GCAGTAGCAC TGGAAAGGTT CGGCGGTGTG
GATGTCCTGG TGAACAATGC CGGTATTTAT GAAACAAAAC CTTTCCTGGA AGTAGACGAA
GCTTATCTTG ATCGTTTCCT GAACACAAAT CTGAAAGGAA CCTTCTTTAC CACCCAGGCG
CTGCTGCCAC AGATGCTCAA ACAGAAAGAC GGTACCATCA TCAATATCGG TACGCCGCTG
GTATATCATG CATTAGGCGG AGCGCCATCT ACCGCGCCGA TATCTTCCAA AGGCGCGATC
CACTCGCTGA CCCTGCAACT GGCCGCTGAA TTTGGTAAAC AGAATATCCG TGTCAATACC
ATCGCTCCCG GTGTGATCCG CACACCGATG CATGGTGAGG ATGCAGACCA GAGCGCAGGT
ATTCATCTGC TGAACAGGGT AGGGGAAGTA GAACATGTAG CACAGATGGT ATATGCAGTA
GCAAAAAATG ACTTCATCAG CGGTACCATT ATAAATGTAG ATGGTGGTAT GGGCGCTGGT
CATAACCTGA ATTGA
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| Protein sequence | MKKQTVIVTG ASSGIGKEVA RYFLDKGDNV VINSSTAEKL EQVYQELGAG TNLAMVAGNV
KDKSTGERLL AVALERFGGV DVLVNNAGIY ETKPFLEVDE AYLDRFLNTN LKGTFFTTQA
LLPQMLKQKD GTIINIGTPL VYHALGGAPS TAPISSKGAI HSLTLQLAAE FGKQNIRVNT
IAPGVIRTPM HGEDADQSAG IHLLNRVGEV EHVAQMVYAV AKNDFISGTI INVDGGMGAG
HNLN
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