| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0859 |
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| Symbol | |
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| ID | 5373663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1016911 |
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| End bp | 1017693 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829054 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001365076 |
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| Protein GI | 152999395 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTA ATACCTCAAA TCTCGCCATT ATTGTCGGTG GTAGCAGTGG CATAGGTTTC
GAAACGGCCA AACAACTGGC CGAACAAGGC GTATCAGTGC TCATCGTCGG CAATCAGCAA
GATAAACTCA CCGCAGCCGT TGCTGCAATA AAACATGCCC ATCCAGCAGC CGAGTTACGC
GTCGACGGTT TTCAAGCCAA CCTTTACCAA GCTGCGGATG TTAATCGGTT GGTTGCGCAC
ATTAGCCAGC TTGAGCAAAA GGTCGGCTAC CTAGTCAATG CGGCGGGGTA TTTCAATCCC
AAATCCTTTA TCGACCACTC AGAGGCTGAT TACGATCTCT ATATGGCGTT AAATAAAGCC
CTGTTCAAGA TTACTCAAGC CGTGACCCAC AAGATGATCG ATACGGGCGG TGGTAGTATA
GTGAACATAG GATCTATGTG GGCAAAACAA GCGGTTAAAG CCACGCCTTC GTCAGCGTAT
TCCATGGCCA AAGCCGGATT ACACGCATTA ACCCAGCACT TAGCGATGGA ACTGGCGGAT
AAGCATATTC GCGTCAATGC GGTTTCACCC GCCGTGGTGA ATACGCCCAT CTATAACGCT
TTTATCCCAG AGGCAGAGCT AGACCAAGTG ATTGAAAGCT TCAACGCTTT TCACCCGATT
GGTAGAGTCG GCACGCCGAG CGATGTGGCG AACAGCATTT GTTTTCTTTT ATCCAATGAC
ACCAGCTGGG TGACCGGCGC AATTTGGGAT GTTGATGGCG GCGTGATGGC TGGACGCAAC
TAA
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| Protein sequence | MQFNTSNLAI IVGGSSGIGF ETAKQLAEQG VSVLIVGNQQ DKLTAAVAAI KHAHPAAELR
VDGFQANLYQ AADVNRLVAH ISQLEQKVGY LVNAAGYFNP KSFIDHSEAD YDLYMALNKA
LFKITQAVTH KMIDTGGGSI VNIGSMWAKQ AVKATPSSAY SMAKAGLHAL TQHLAMELAD
KHIRVNAVSP AVVNTPIYNA FIPEAELDQV IESFNAFHPI GRVGTPSDVA NSICFLLSND
TSWVTGAIWD VDGGVMAGRN
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