| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1496 |
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| Symbol | |
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| ID | 6115735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1866117 |
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| End bp | 1866884 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632980 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001759879 |
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| Protein GI | 170725853 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTA CACATACAGG TATCGCAATG GTGATCGGTG GTTCAAGTGG AATGGGCTTT
GAATCAGCTA AGCAGTTATT ACAAGCCAAT ATTGAAGTGG TGATCATAGG CAATAATATA
TCCAAACTTG ATAAAGCAGT ATCAGAGCTC AGTACATTGG GTAAAGTCTC GTCCATTCAA
GCCAACCTTT ACCAAGAGAG CCAAGTACAG CGAATTGTAG ATTTTATTGA ACAGCCATCG
ACTAAAATTA GCTATCTGGT TAATGCAGCA GGATACTTCA ATCCTAAGCC CTTTATTGAC
CATAGCCTGA GCGACTATGA GATCTATATG GGGTTAAATA AAGCCAGCTT TATTCTCTCT
CAAGCCGTGG CTAAAAATAT GATGAGCAAT GGTGGCGGAA ATATCGTTAA TATCGGCTCA
ATGTGGGCAA AGCAGGCGAT TAAAGCCACC CCCTCTTCAG CCTATTCGAT GGCCAAAGCA
GGACTTCATG CGCTAACTCA GCATATGGCG ATGGAACTTG CTGACTTTAA TATCAGGGTT
AATGCCATCT CACCTGCAGT GGTCAAGACT CCCATCTATG AGACCTTTAT TGATCCGGCT
CAAATGGACG ATGCATTAGC AGGTTTTAAC GGATTTCATC CCATTGGTAG AATAGGCACG
CCAAGCGACA TAGCTAACAG CATCAGCTTC CTACTCAGCG ATGAAAGCAG CTGGGTTACT
GGCGCAATAT GGGATATCGA CGGTGGCGTC ATGGCCGGAC GTAATTAG
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| Protein sequence | MTFTHTGIAM VIGGSSGMGF ESAKQLLQAN IEVVIIGNNI SKLDKAVSEL STLGKVSSIQ
ANLYQESQVQ RIVDFIEQPS TKISYLVNAA GYFNPKPFID HSLSDYEIYM GLNKASFILS
QAVAKNMMSN GGGNIVNIGS MWAKQAIKAT PSSAYSMAKA GLHALTQHMA MELADFNIRV
NAISPAVVKT PIYETFIDPA QMDDALAGFN GFHPIGRIGT PSDIANSISF LLSDESSWVT
GAIWDIDGGV MAGRN
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