| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0396 |
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| Symbol | kduD |
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| ID | 4201226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 477654 |
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| End bp | 478430 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638081280 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_694853 |
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| Protein GI | 110799221 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGG AGAAATTTTC TTTAGACTTT TTTAAATTAG ATGGTAAAGT AGCTATAGTA
ACTGGTGGAA ACACTGGATT AGGAATGGCT TATGTAGAAG CTCTTGCAGC AGCAGGTGCT
GATGTTTTAG TAACAACTTT TGATAACAAT ACTGAAGAGG TAAAAAATAT TGTTGAATCA
TTAGGAAGAA AAATTGTATT TGTACAAGGA GATTTAACTA AAAAAGAAAC AAGAGATAAG
GTTGTATCAA CTTGTTTAGA GGAATTTGGA AAAATAGATA TATTAGTAAA TAATGCAGGA
ACAATAAGAA GAGCACCATT ACTTGAGTAC AAAGATGAAG ATTGGCAAGC TGTAATGGAT
ATAAACTTAA ATTCAGTTTA CTATTTATCA CAAGCAGTTG CTAAAGTAAT GGCTAAGCAA
GGATATGGTA AGATTATAAA CATAGCATCT ATGTTATCAT TCCAAGGTGG AAAATTTGTT
CCTCCATACA CTGCAAGTAA ACATGGAGTT GCAGGAATAA CAAAGGCATT TGCTAATGAA
TTAGCAGATT TAAATATACA AGTAAATGCT ATTGCACCTG GATATATAAA AACTGCTAAC
ACTGCACCAA TTAGAGCAGA TAAAGCTAGA AACCAAGAAA TTCTTTCAAG AATACCAGCA
GGTAGATGGG GAGAAGTTTC AGATTTAATG GGAACAGTTG TATTCTTATC AAGTAAAGCA
TCTGATTACT TAAATGGACA CATATTAGCT ATAGACGGTG GGTGGTTAGT GAGATGA
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| Protein sequence | MNMEKFSLDF FKLDGKVAIV TGGNTGLGMA YVEALAAAGA DVLVTTFDNN TEEVKNIVES
LGRKIVFVQG DLTKKETRDK VVSTCLEEFG KIDILVNNAG TIRRAPLLEY KDEDWQAVMD
INLNSVYYLS QAVAKVMAKQ GYGKIINIAS MLSFQGGKFV PPYTASKHGV AGITKAFANE
LADLNIQVNA IAPGYIKTAN TAPIRADKAR NQEILSRIPA GRWGEVSDLM GTVVFLSSKA
SDYLNGHILA IDGGWLVR
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