| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0392 |
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| Symbol | kduD |
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| ID | 4204548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 479364 |
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| End bp | 480140 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642564949 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_697721 |
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| Protein GI | 110803267 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGG AGAAATTTTC TTTAGATTTT TTTAAATTAG ATGGTAAAGT AGCTATAGTA
ACTGGTGGAA ATACTGGATT AGGAATGGCT TATGTAGAAG CTCTTGCAAA AGCAGGTGCT
GATGTTTTAG TAACGACCTT TGATAACAAT ACTGAAGAAG TAAAAAATAT TGTTGAATCA
TTAGGAAGAA AAATTGTATT TGTACAAGGA GATTTAACTA AAAAAGAAAC AAGAGATAAG
GTTGTATCAA CTTGTTTAGA AGAGTTTGGT AAAATAGATA TATTAGTAAA TAATGCAGGA
ACAATAAGAA GAGCACCATT ACTTGAATAT AAAGATGAAG ATTGGCAAGC TGTAATGGAT
ATAAACTTAA ACTCAGTTTA CTATTTATCA CAAGCAGTTG CTAAAGTAAT GGCTAAGCAA
GGATATGGTA AGATTATAAA CATAGCATCT ATGTTATCAT TCCAAGGTGG AAAATTTGTT
CCTCCATACA CTGCAAGTAA ACATGGAGTT GCAGGAATAA CAAAGGCATT TGCTAATGAA
TTAGCAGATT TAAATATACA AGTAAATGCT ATTGCACCTG GATATATAAA AACTGCTAAC
ACTGCACCAA TTAGAGCAGA TAAAGCTAGA AACCAAGAAA TTCTTTCAAG AATACCAGCA
GGTAGATGGG GAGAAGTTTC AGATTTAATG GGAACAGTTG TATTCTTATC AAGTAAAGCA
TCTGATTACT TAAATGGACA CATATTAGCT ATAGACGGTG GGTGGTTAGT GAGATGA
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| Protein sequence | MNMEKFSLDF FKLDGKVAIV TGGNTGLGMA YVEALAKAGA DVLVTTFDNN TEEVKNIVES
LGRKIVFVQG DLTKKETRDK VVSTCLEEFG KIDILVNNAG TIRRAPLLEY KDEDWQAVMD
INLNSVYYLS QAVAKVMAKQ GYGKIINIAS MLSFQGGKFV PPYTASKHGV AGITKAFANE
LADLNIQVNA IAPGYIKTAN TAPIRADKAR NQEILSRIPA GRWGEVSDLM GTVVFLSSKA
SDYLNGHILA IDGGWLVR
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