| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0882 |
|---|
| Symbol | |
|---|
| ID | 7087243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1033716 |
|---|
| End bp | 1034498 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643459796 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002356823 |
|---|
| Protein GI | 217972072 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTA ATACCTCAAA TCTCGCCATT ATTGTCGGTG GTAGCAGCGG CATAGGTTTC
GAAACGGCCA AACAACTGGC CGAACAAGGC GTATCAGTGC TCATCGTCGG TAATCAGCAA
GATAAACTCA CCGCAGCCGT TGCTGCGATC AAACATGCCC ATCCAGCAGC CGAGTTACGC
GTCGACGGTT TTCAAGCCAA CCTTTACCAA GCTGCGGATG TTAATCGGCT GATTGCGCAC
ATTACCCAGC TTGAGCAAAA GGTCGGCTAC CTAGTCAATG CGGCGGGTTA TTTCAATCCC
AAATCCTTTA TCGACCACTC AGAGGCTGAT TACGATCTCT ATATGGCGTT AAATAAAGCC
CTATTCAAAA TCACCCAAGC CGTGACCCAC AAGATGATCG ATGCGGGCGG TGGTAGTATA
GTGAACATAG GTTCTATGTG GGCAAAACAA GCGGTTAAAG CCACGCCTTC GTCGGCGTAT
TCCATGGCCA AAGCCGGATT ACACGCATTA ACCCAGCACT TAGCGATGGA ACTGGCAGAC
AAGCATATTC GCGTCAACGC GGTTTCACCT GCCGTGGTGA ATACGCCCAT CTATAACGCT
TTTATCCCAG AGGCAGAGCT AGACCAAGTG ATTGAAAGCT TCAACGCTTT TCACCCTATT
GGTAGAGTCG GCACGCCAGC CGATGTAGCA AACAGCATTT GTTTTCTTTT ATCCAATGAC
ACTAGCTGGG TTACCGGCGC GATTTGGGAT GTTGATGGCG GCGTGATGGC TGGACGCAAC
TAA
|
|---|
| Protein sequence | MQFNTSNLAI IVGGSSGIGF ETAKQLAEQG VSVLIVGNQQ DKLTAAVAAI KHAHPAAELR
VDGFQANLYQ AADVNRLIAH ITQLEQKVGY LVNAAGYFNP KSFIDHSEAD YDLYMALNKA
LFKITQAVTH KMIDAGGGSI VNIGSMWAKQ AVKATPSSAY SMAKAGLHAL TQHLAMELAD
KHIRVNAVSP AVVNTPIYNA FIPEAELDQV IESFNAFHPI GRVGTPADVA NSICFLLSND
TSWVTGAIWD VDGGVMAGRN
|
|---|
| |