| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0634 |
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| Symbol | |
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| ID | 5774296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 575917 |
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| End bp | 576678 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316270 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001581968 |
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| Protein GI | 161528142 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTAA ATGACAAAGT AGCAATTGTT ACAGGAGCAT CAAGTGACAT TGGAAAAGGC
ATTGCCAAGA AATTTGTCGA AGAAGGAGCA AAAGTAATTC TTATTGCAAG AAATCTAGAA
GGATTAGAAA ATACAAGAAA AGAGATAGGA AATGAAGATT CAACTGCAGC TATGACTTGT
GATTTAGTAG ATGAATCTCA AACACTACAA GTTGTAAATC AAATTATGGA TACATATGGG
AAGATAGACA TTCTTGTAAA CAATGCAGGT GCAATTAATG ATCCAATTCA TTTTCATGAA
ATGCAAAATT CAGAGATTCA AAAACTCATC AATGTGAACT TACTAGGAGT TTTCAATATG
ACAAAAGCTG TTTTGACAAA AATGGCAGAT GTCAAAAGCG GTTCAATTGT AAACATTGGC
TCCATCTCAA GTGAGAGAGC AATTCCACGA GTGCACTTGG CAGTTTATTC TGCAACAAAA
GCAGCAATTC CAATGTTTAC AAAGTCAATT GCAGTAGAAT ATGCAAGAAG AAACATTAGA
TGTAATTGTG TCAATCCTGG AATAATCAAT TCAGGCTCGA TAAAGCCATA CCTTGATGAC
CCACAAGCAA GAAAAGTACT AGAGGAAAGA TTACCACTTG CAAGGGTCGG AGAGCCAGAA
GACGTTGCAA ATGCAGTAGC ATACTTGGCT TCAGATGAAG CGAGTTGGGT TACTGGCACG
ATTCTAAATG TTGATGGTGG AAAGACAGCT TCAGAAGGAT AG
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| Protein sequence | MKLNDKVAIV TGASSDIGKG IAKKFVEEGA KVILIARNLE GLENTRKEIG NEDSTAAMTC
DLVDESQTLQ VVNQIMDTYG KIDILVNNAG AINDPIHFHE MQNSEIQKLI NVNLLGVFNM
TKAVLTKMAD VKSGSIVNIG SISSERAIPR VHLAVYSATK AAIPMFTKSI AVEYARRNIR
CNCVNPGIIN SGSIKPYLDD PQARKVLEER LPLARVGEPE DVANAVAYLA SDEASWVTGT
ILNVDGGKTA SEG
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