| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3913 |
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| Symbol | |
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| ID | 5318647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 365935 |
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| End bp | 366648 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775723 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001312656 |
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| Protein GI | 150376060 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG AACAGAAAGT CGTCATCGTC ACCGGCGCCT CGCAAGGGAT CGGCGCCGGA
TTGGTCCGCG CCTATCGAGA CCGGAACTAC CGCGTCGTCG CGACCTCGAG ATCCATCAAG
CCGAGCGGCG ACCCGGATAT CCATACGGTC GCTGGCGACA TCAGCAAGCC GGAAACCGCC
GAGCGGATCG TGCGCGAGGG GATCGAGCAC TTCGGCCGCA TCGACTCTCT GGTGAACAAT
GCCGGCGTTT TCCTCGCCAA GCCGTTCATC GAGATGACTC AGGAGGACTA CGAGCATAAT
CTCGGGGTGA ACGTGGCCGG GTTCTTCCAC ATCACCCAGC GCGCAGCCGT GGAAATGCTG
AAGCAGGGCT CAGGTCATAT CGTCAGCATC ACCACCAGTC TGGTCGACCA GCCGATGGTC
GGTATGCCCT CCGCACTTGC CTCTCTGACG AAGGGTGGCC TGAACGCGGT AACCCGTTCG
CTGGCGATGG AATTTTCCAG GAGTGGTGTT CGCGTCAATG CCGTTTCTCC GGGTGTAATC
AAGACGCCCA TGCATCCGAT CGAGACGCAT TCGGCTTTGG CCGCACTGCA CCCGGTTGGC
AGGATGGGCG ATATCAGCGA CGTCGTGGGT GCCGTCCTCT ATCTCGAAAA TGCAGGATTC
ATCACCGGCG AGATCCTCCA CGTCGACGGC GGCCAGAACG CCGGACGCTG GTAA
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| Protein sequence | MSNEQKVVIV TGASQGIGAG LVRAYRDRNY RVVATSRSIK PSGDPDIHTV AGDISKPETA
ERIVREGIEH FGRIDSLVNN AGVFLAKPFI EMTQEDYEHN LGVNVAGFFH ITQRAAVEML
KQGSGHIVSI TTSLVDQPMV GMPSALASLT KGGLNAVTRS LAMEFSRSGV RVNAVSPGVI
KTPMHPIETH SALAALHPVG RMGDISDVVG AVLYLENAGF ITGEILHVDG GQNAGRW
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