| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3420 |
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| Symbol | |
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| ID | 6179524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 343413 |
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| End bp | 344183 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641683189 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810103 |
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| Protein GI | 172062452 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0826034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATT TTTCCGGTAA AAAACTTCTT GTCGTCGGTG GCACCAGCGG CATCGGGCTC
GCAACGGCCA AACAAGTACT GAAAAGTGGC GGTAGCGTCG TCTTAACGGG TAATAGAAAG
GACAAGGCTG AAGCTGTGCG CGCCGAATTG AGCGGGCTCG GTCCGGTCTC CGTGATCGCA
GCGAACCTCA TGACCGAGGA AGGCATGAAC GCCATCCGTG CGGAGATCAA CGCGAATCAC
AAAGACATTT CGCTGTTGGT GAATTCTGCG GGCATCTTTG TTCCGAAAGC CTTCATCGAC
CACGAAGCAT CCGATTACGA CATGTACTTG TCGCTCAATC GCGCCACTTT CTTTATTACG
CAGGACGTGG TCAGGAACAT GCTCGCCGCG AAGCGCCAAG GCGCGATCGT GAACGTCGGG
TCGATCGGCG CGCAGGCAGC GCTGGGCGAC TCGGCGGCAT CCGCGTATTC CATGGCGAAA
GCAGGTCTGC ACGCGCTCAC GCGCAATCTC GCGATTGAAC TCGCCGATGC GGGTATCCGG
GTGAACGCTG TCTCGCCGGC GATCGTACAG ACGTCGATTT ACGAAGGCTT CATGGCGAAG
GAAGACATTG CCGGTGCGAT GAAAGCGCTC GATTCGTTTC ATCCGCTCGG ACGCGTCGGT
ACACCCGAAG ACGTTGCGAA CACGATTGTC TTCCTGCTTT CGGACAAGAC CTCGTGGGTA
ACCGGTGCCA TCTGGAATGT GGACGCGGGG GTGATGGCAG TGCGCAAATG A
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| Protein sequence | MKDFSGKKLL VVGGTSGIGL ATAKQVLKSG GSVVLTGNRK DKAEAVRAEL SGLGPVSVIA
ANLMTEEGMN AIRAEINANH KDISLLVNSA GIFVPKAFID HEASDYDMYL SLNRATFFIT
QDVVRNMLAA KRQGAIVNVG SIGAQAALGD SAASAYSMAK AGLHALTRNL AIELADAGIR
VNAVSPAIVQ TSIYEGFMAK EDIAGAMKAL DSFHPLGRVG TPEDVANTIV FLLSDKTSWV
TGAIWNVDAG VMAVRK
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