Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2052 |
Symbol | |
ID | 5607093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2245444 |
End bp | 2246190 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937590 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001478283 |
Protein GI | 157370294 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAG TAAAAACAGT AATTGTTACC GGCGCATCCA GCGGATTGGG CTTCGCTATT GCGCGGGCTT ACCTGACGCG TGGCTACAAT GTCGTGGGCA ACGCACGCTC ACTGGAACGT TTGCAGGCAG CGGCCAACCA ACTCGGTAAT CCTGCGAACC TGCTGCTGGT TCCCGGTGAT ATCGCCCTGC CGGAAACCGC GACCCGCCTG TTCGAACAGG CAGAAGAAAA CTTTGGTCAG GTCGATATTC TGATCAATAA CGCGGGGATC TTCATGTCCA AACCGGTGGC AGAGTATTCG GAGGAAGATG TCGACGCGAT GCTGGCGACC AATCTGAAAG GTTTCTTCTA TCCCTCACAG GCCGCTGCCC GTCACATGGT GCCCAATGGC GCTGGCCACA TCGTCACCAT CACTGCCGCC ATCGCCATGC AGCCCATCAG CAAAGTCCCG GCCCTGCTGC CGATTATGGT CAAAGGCGGG TTGAACCAGG CCACCCGCGG GCTGGCGCTG GAACTGGCAC CGCATAATGT GATGGTCAAC GCCGTTGCTC CCGGCATCAT TGCCACTCCA CTGACCATGA GCAACCCGGA TGAACAAAGC CTGGCGTTTA TGAAACAGAT GGCCCCGACC CAACGCATCG GTCAGCCGCA GGATATTGTC GACGCGGTGC TGTACCTGAC TGACTCAAGC TTTGTCACCG GCACCGTCGT TGCCGTAGAC GGCGGCACTA CCGCCGGCGT CTGGTAA
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Protein sequence | MDRVKTVIVT GASSGLGFAI ARAYLTRGYN VVGNARSLER LQAAANQLGN PANLLLVPGD IALPETATRL FEQAEENFGQ VDILINNAGI FMSKPVAEYS EEDVDAMLAT NLKGFFYPSQ AAARHMVPNG AGHIVTITAA IAMQPISKVP ALLPIMVKGG LNQATRGLAL ELAPHNVMVN AVAPGIIATP LTMSNPDEQS LAFMKQMAPT QRIGQPQDIV DAVLYLTDSS FVTGTVVAVD GGTTAGVW
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