Gene Spro_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2052 
Symbol 
ID5607093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2245444 
End bp2246190 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID640937590 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001478283 
Protein GI157370294 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAG TAAAAACAGT AATTGTTACC GGCGCATCCA GCGGATTGGG CTTCGCTATT 
GCGCGGGCTT ACCTGACGCG TGGCTACAAT GTCGTGGGCA ACGCACGCTC ACTGGAACGT
TTGCAGGCAG CGGCCAACCA ACTCGGTAAT CCTGCGAACC TGCTGCTGGT TCCCGGTGAT
ATCGCCCTGC CGGAAACCGC GACCCGCCTG TTCGAACAGG CAGAAGAAAA CTTTGGTCAG
GTCGATATTC TGATCAATAA CGCGGGGATC TTCATGTCCA AACCGGTGGC AGAGTATTCG
GAGGAAGATG TCGACGCGAT GCTGGCGACC AATCTGAAAG GTTTCTTCTA TCCCTCACAG
GCCGCTGCCC GTCACATGGT GCCCAATGGC GCTGGCCACA TCGTCACCAT CACTGCCGCC
ATCGCCATGC AGCCCATCAG CAAAGTCCCG GCCCTGCTGC CGATTATGGT CAAAGGCGGG
TTGAACCAGG CCACCCGCGG GCTGGCGCTG GAACTGGCAC CGCATAATGT GATGGTCAAC
GCCGTTGCTC CCGGCATCAT TGCCACTCCA CTGACCATGA GCAACCCGGA TGAACAAAGC
CTGGCGTTTA TGAAACAGAT GGCCCCGACC CAACGCATCG GTCAGCCGCA GGATATTGTC
GACGCGGTGC TGTACCTGAC TGACTCAAGC TTTGTCACCG GCACCGTCGT TGCCGTAGAC
GGCGGCACTA CCGCCGGCGT CTGGTAA
 
Protein sequence
MDRVKTVIVT GASSGLGFAI ARAYLTRGYN VVGNARSLER LQAAANQLGN PANLLLVPGD 
IALPETATRL FEQAEENFGQ VDILINNAGI FMSKPVAEYS EEDVDAMLAT NLKGFFYPSQ
AAARHMVPNG AGHIVTITAA IAMQPISKVP ALLPIMVKGG LNQATRGLAL ELAPHNVMVN
AVAPGIIATP LTMSNPDEQS LAFMKQMAPT QRIGQPQDIV DAVLYLTDSS FVTGTVVAVD
GGTTAGVW