More than 300 homologs were found in PanDaTox collection
for query gene Syncc9902_1307 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  100 
 
 
398 aa  824    Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  79.79 
 
 
386 aa  644    Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  75.46 
 
 
379 aa  587  1e-166  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  65 
 
 
380 aa  527  1e-148  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  62.57 
 
 
384 aa  507  9.999999999999999e-143  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  62.57 
 
 
384 aa  505  9.999999999999999e-143  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  56.99 
 
 
379 aa  472  1e-132  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  57.68 
 
 
379 aa  471  1e-132  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  57.14 
 
 
379 aa  464  1e-129  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  58.13 
 
 
384 aa  463  1e-129  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  57.26 
 
 
379 aa  459  9.999999999999999e-129  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  58.27 
 
 
389 aa  457  1e-127  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  60.11 
 
 
391 aa  452  1.0000000000000001e-126  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  56.03 
 
 
380 aa  440  9.999999999999999e-123  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  56.03 
 
 
380 aa  440  9.999999999999999e-123  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  57.37 
 
 
379 aa  438  9.999999999999999e-123  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  57.14 
 
 
385 aa  435  1e-121  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  56.76 
 
 
388 aa  435  1e-121  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  51.72 
 
 
376 aa  383  1e-105  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  52.69 
 
 
374 aa  377  1e-103  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  52.65 
 
 
386 aa  374  1e-102  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  52.8 
 
 
386 aa  374  1e-102  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  52.52 
 
 
373 aa  374  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  50.8 
 
 
372 aa  369  1e-101  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  52.27 
 
 
373 aa  371  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  51.99 
 
 
373 aa  371  1e-101  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  51.69 
 
 
389 aa  367  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  50.66 
 
 
392 aa  362  5.0000000000000005e-99  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  49.6 
 
 
366 aa  361  1e-98  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  49.87 
 
 
391 aa  360  3e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  49.87 
 
 
373 aa  358  8e-98  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  48.68 
 
 
380 aa  357  2.9999999999999997e-97  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  47.47 
 
 
373 aa  355  5.999999999999999e-97  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  49.74 
 
 
374 aa  354  2e-96  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  48.81 
 
 
374 aa  353  2.9999999999999997e-96  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  47.51 
 
 
376 aa  351  1e-95  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  47.49 
 
 
377 aa  350  2e-95  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  50.4 
 
 
373 aa  350  3e-95  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.95 
 
 
369 aa  350  3e-95  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  48.01 
 
 
374 aa  348  1e-94  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  48.01 
 
 
374 aa  347  2e-94  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  48.02 
 
 
383 aa  346  5e-94  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  48.69 
 
 
396 aa  345  6e-94  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0203745 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  49.07 
 
 
385 aa  345  8e-94  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  48.96 
 
 
397 aa  344  1e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  48.3 
 
 
397 aa  343  2e-93  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  48.28 
 
 
377 aa  344  2e-93  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  48.92 
 
 
385 aa  343  4e-93  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  48.31 
 
 
379 aa  342  5.999999999999999e-93  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  47.18 
 
 
384 aa  341  1e-92  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  47.17 
 
 
378 aa  340  2e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  48.05 
 
 
397 aa  340  2e-92  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  46.68 
 
 
397 aa  340  2e-92  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2165  carbamoyl phosphate synthase small subunit  48.05 
 
 
382 aa  340  2e-92  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  46.34 
 
 
365 aa  340  2.9999999999999998e-92  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  46.95 
 
 
378 aa  340  2.9999999999999998e-92  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_010117  COXBURSA331_A1431  carbamoyl phosphate synthase small subunit  47.58 
 
 
382 aa  340  4e-92  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  48.54 
 
 
391 aa  339  4e-92  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  46.7 
 
 
398 aa  339  5e-92  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  48.54 
 
 
382 aa  339  5e-92  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  48.43 
 
 
381 aa  339  5.9999999999999996e-92  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  48.4 
 
 
384 aa  338  8e-92  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_009727  CBUD_1371  carbamoyl phosphate synthase small subunit  47.58 
 
 
402 aa  338  8e-92  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  47.63 
 
 
416 aa  338  9e-92  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  48.79 
 
 
393 aa  338  9.999999999999999e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  46.01 
 
 
359 aa  338  9.999999999999999e-92  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  47.7 
 
 
379 aa  338  9.999999999999999e-92  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  46.92 
 
 
367 aa  338  9.999999999999999e-92  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  48.54 
 
 
382 aa  338  9.999999999999999e-92  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_05860  carbamoyl-phosphate synthase small subunit  46.95 
 
 
373 aa  337  1.9999999999999998e-91  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.261865  n/a   
 
 
-
 
NC_009484  Acry_0912  carbamoyl phosphate synthase small subunit  50.13 
 
 
447 aa  337  1.9999999999999998e-91  Acidiphilium cryptum JF-5  Bacteria  normal  0.203932  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  48.28 
 
 
382 aa  337  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  48.93 
 
 
391 aa  337  1.9999999999999998e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  45.62 
 
 
371 aa  337  1.9999999999999998e-91  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  48.28 
 
 
382 aa  337  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  49.87 
 
 
373 aa  337  1.9999999999999998e-91  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  47.57 
 
 
369 aa  337  2.9999999999999997e-91  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  48 
 
 
381 aa  337  2.9999999999999997e-91  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  46.7 
 
 
383 aa  336  3.9999999999999995e-91  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  46.81 
 
 
369 aa  336  3.9999999999999995e-91  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010172  Mext_0615  carbamoyl-phosphate synthase, small subunit  48.56 
 
 
416 aa  336  3.9999999999999995e-91  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.156891 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  48 
 
 
379 aa  336  5e-91  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0626  carbamoyl-phosphate synthase, small subunit  48.56 
 
 
416 aa  336  5e-91  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.265795 
 
 
-
 
NC_010725  Mpop_0591  carbamoyl-phosphate synthase, small subunit  48.32 
 
 
416 aa  335  5.999999999999999e-91  Methylobacterium populi BJ001  Bacteria  normal  0.88824  normal  0.101077 
 
 
-
 
NC_009485  BBta_6791  carbamoyl phosphate synthase small subunit  48.16 
 
 
398 aa  335  5.999999999999999e-91  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0374748 
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  47.53 
 
 
405 aa  335  5.999999999999999e-91  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.295908 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  46.98 
 
 
378 aa  335  7e-91  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  47.62 
 
 
382 aa  335  7e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  47.99 
 
 
384 aa  335  1e-90  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_011365  Gdia_3032  carbamoyl phosphate synthase small subunit  47.09 
 
 
467 aa  335  1e-90  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.11486  normal  0.0418192 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  47.18 
 
 
372 aa  334  1e-90  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2871  carbamoyl phosphate synthase small subunit  47.63 
 
 
396 aa  334  2e-90  Nitrobacter hamburgensis X14  Bacteria  normal  0.393325  n/a   
 
 
-
 
NC_008044  TM1040_2294  carbamoyl phosphate synthase small subunit  47.12 
 
 
386 aa  333  3e-90  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  47.24 
 
 
369 aa  333  3e-90  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  46.4 
 
 
414 aa  333  4e-90  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  47.09 
 
 
393 aa  333  4e-90  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  46.52 
 
 
379 aa  332  5e-90  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  47.03 
 
 
401 aa  332  5e-90  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  45.45 
 
 
415 aa  332  6e-90  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.210414 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  47.34 
 
 
391 aa  332  7.000000000000001e-90  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
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