| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2294 |
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| Symbol | |
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| ID | 4078478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2412716 |
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| End bp | 2413876 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007616 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_614288 |
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| Protein GI | 99082134 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAA CCGTTTCGCC GAAGCCAACC GCCTGCCTGG CCCTTGCAGA TGGCACCGTG
TTCTATGGAC ACGGGTTTGG CGCCACCGGG CGATGCGTGG CCGAGCTGTG CTTTAACACC
GCAATGACCG GCTATCAGGA AATCATGACC GACCCTTCCT ATGCAGGTCA GGTCGTCACC
TTCACCTTCC CCCACATCGG CAACACCGGC GTCACCCCCG AGGATGACGA AACCGCCGAC
CCGGTGGCCG CAGGCATGGT GGTGAAATGG GATCCGACGC TGTCCTCCAA CTGGCGCGCC
ACCGAAGAGC TGAAGTCCTG GCTCACCCGC ACGGGCCGCA TCGCCATCGG CGGCGTGGAC
ACCCGCCGTC TGACTCGCGC GATCCGCCAG CAGGGCGCGC CGCATGTGGC GATGGAGCAT
AACCCGGACG GGAATTTCGA TCTTGAGGCG CTGGTCGCCG CCGCCCGCGC CTGGCCCGGC
CTTGAGGGCA TGGACCTCGC CAAGGACGTG ACCTGCGCGC AGTCCTACCG CTGGGATGAG
ATGCGTTGGG CCTGGCCCGA GGGCTACACC CGTCAGGAAG AGCCCAAGCA CAAGGTGGTC
GCCATCGACT ATGGTGCCAA GCGCAACATC CTGCGCTGCC TCGCCTCGGC GGGCTGCGAT
GTCACCGTGC TGCCGGCCAC CGCAACCTCG GAAGAGGTAC TGGCCCATGG CCCTGATGGT
GTGTTCCTCT CCAATGGCCC CGGCGACCCG GCCGCAACCG GCGCATACGC TGTGCCGATG
ATCAAGGAAA TCCTGGATAA GACCGACTTG CCGGTCTTTG GGATCTGTCT GGGCCACCAG
ATGCTCGCAC TCGCTTTGGG GGCCAAGACC ACCAAGATGA ACCACGGCCA CCACGGCGCC
AACCACCCGG TCAAGGAACA CGGCACCGGC AAGGTGGAGA TCACGTCGAT GAACCACGGC
TTTGCAGTGG ATGCTCAAAC CCTGCCCGAG GGCGTCGAAG AGACCCATGT CTCGCTGTTT
GACGGCTCCA ACTGCGGCAT TCGCATGACC GATCGCCCGG TCTACTCCGT GCAGCACCAC
CCCGAGGCCA GCCCCGGCCC GCAGGACAGT TTCTATCTGT TCGAGCGCTT TGCAGAGGCG
ATGGCCGCGC GCAAGGCCTG A
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| Protein sequence | MVETVSPKPT ACLALADGTV FYGHGFGATG RCVAELCFNT AMTGYQEIMT DPSYAGQVVT
FTFPHIGNTG VTPEDDETAD PVAAGMVVKW DPTLSSNWRA TEELKSWLTR TGRIAIGGVD
TRRLTRAIRQ QGAPHVAMEH NPDGNFDLEA LVAAARAWPG LEGMDLAKDV TCAQSYRWDE
MRWAWPEGYT RQEEPKHKVV AIDYGAKRNI LRCLASAGCD VTVLPATATS EEVLAHGPDG
VFLSNGPGDP AATGAYAVPM IKEILDKTDL PVFGICLGHQ MLALALGAKT TKMNHGHHGA
NHPVKEHGTG KVEITSMNHG FAVDAQTLPE GVEETHVSLF DGSNCGIRMT DRPVYSVQHH
PEASPGPQDS FYLFERFAEA MAARKA
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