More than 300 homologs were found in PanDaTox collection
for query gene CA2559_05860 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014230  CA2559_05860  carbamoyl-phosphate synthase small subunit  100 
 
 
373 aa  772    Croceibacter atlanticus HTCC2559  Bacteria  normal  0.261865  n/a   
 
 
-
 
NC_009441  Fjoh_0369  carbamoyl phosphate synthase small subunit  69.4 
 
 
372 aa  550  1e-155  Flavobacterium johnsoniae UW101  Bacteria  normal  0.528508  n/a   
 
 
-
 
NC_013162  Coch_0275  carbamoyl phosphate synthase small subunit  68.66 
 
 
366 aa  540  9.999999999999999e-153  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000180913  n/a   
 
 
-
 
NC_013061  Phep_0705  carbamoyl phosphate synthase small subunit  59.05 
 
 
370 aa  468  1.0000000000000001e-131  Pedobacter heparinus DSM 2366  Bacteria  normal  0.274558  normal 
 
 
-
 
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  58.13 
 
 
365 aa  465  9.999999999999999e-131  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_013132  Cpin_1645  carbamoyl phosphate synthase small subunit  56.39 
 
 
369 aa  454  1.0000000000000001e-126  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  56.44 
 
 
368 aa  446  1.0000000000000001e-124  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5758  carbamoyl-phosphate synthase, small subunit  52.32 
 
 
367 aa  414  1e-114  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  49.86 
 
 
379 aa  369  1e-101  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  47.38 
 
 
391 aa  364  2e-99  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  48.95 
 
 
384 aa  355  5e-97  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  48.81 
 
 
380 aa  355  6.999999999999999e-97  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  48.81 
 
 
380 aa  355  6.999999999999999e-97  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  50.39 
 
 
379 aa  354  1e-96  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  48.4 
 
 
379 aa  353  2.9999999999999997e-96  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  47.37 
 
 
389 aa  347  2e-94  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  46.02 
 
 
388 aa  338  8e-92  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  46.95 
 
 
398 aa  337  1.9999999999999998e-91  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  46.7 
 
 
380 aa  336  3.9999999999999995e-91  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  47.34 
 
 
380 aa  335  1e-90  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  47.41 
 
 
371 aa  334  1e-90  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  46.13 
 
 
374 aa  333  2e-90  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  46.09 
 
 
385 aa  332  4e-90  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  45.87 
 
 
374 aa  333  4e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  46.13 
 
 
374 aa  332  5e-90  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  46.46 
 
 
388 aa  332  5e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  46.84 
 
 
380 aa  332  6e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  46.4 
 
 
374 aa  332  7.000000000000001e-90  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  45.07 
 
 
373 aa  332  7.000000000000001e-90  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  44.69 
 
 
369 aa  332  7.000000000000001e-90  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  45.79 
 
 
381 aa  332  7.000000000000001e-90  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  45.92 
 
 
369 aa  331  1e-89  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  46.32 
 
 
366 aa  330  3e-89  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  44.24 
 
 
397 aa  330  3e-89  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  45.36 
 
 
386 aa  330  3e-89  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  44.8 
 
 
386 aa  330  3e-89  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  46.81 
 
 
380 aa  330  3e-89  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  46.81 
 
 
380 aa  330  3e-89  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  45.53 
 
 
383 aa  329  4e-89  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  46.07 
 
 
392 aa  329  4e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  46.95 
 
 
384 aa  329  5.0000000000000004e-89  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  45.38 
 
 
381 aa  329  6e-89  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  46.77 
 
 
397 aa  329  6e-89  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  44.27 
 
 
374 aa  328  1.0000000000000001e-88  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  45.09 
 
 
386 aa  327  1.0000000000000001e-88  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  44.96 
 
 
369 aa  328  1.0000000000000001e-88  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  46.54 
 
 
391 aa  327  1.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  44.12 
 
 
386 aa  327  1.0000000000000001e-88  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  46.56 
 
 
357 aa  328  1.0000000000000001e-88  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  45.81 
 
 
381 aa  327  2.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  45.6 
 
 
367 aa  326  3e-88  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  45.72 
 
 
376 aa  326  3e-88  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  46.51 
 
 
373 aa  327  3e-88  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  47.75 
 
 
379 aa  327  3e-88  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  46.15 
 
 
387 aa  326  5e-88  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008390  Bamb_1167  carbamoyl phosphate synthase small subunit  46.54 
 
 
380 aa  325  5e-88  Burkholderia ambifaria AMMD  Bacteria  normal  0.278191  n/a   
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  46.54 
 
 
381 aa  325  6e-88  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  44.59 
 
 
381 aa  325  7e-88  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  44.59 
 
 
381 aa  325  7e-88  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  44.59 
 
 
381 aa  325  7e-88  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  44.59 
 
 
381 aa  325  7e-88  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  46.46 
 
 
380 aa  325  9e-88  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  44.59 
 
 
381 aa  325  9e-88  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  44.38 
 
 
367 aa  325  1e-87  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  44.64 
 
 
392 aa  325  1e-87  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  44.12 
 
 
391 aa  325  1e-87  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  43.83 
 
 
377 aa  324  1e-87  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  44.64 
 
 
392 aa  325  1e-87  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  44.62 
 
 
393 aa  325  1e-87  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  44.33 
 
 
381 aa  323  2e-87  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  46.25 
 
 
405 aa  323  2e-87  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  46.28 
 
 
384 aa  323  2e-87  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  45.6 
 
 
376 aa  323  3e-87  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  47.48 
 
 
379 aa  323  3e-87  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  44.33 
 
 
381 aa  323  3e-87  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  44.95 
 
 
392 aa  323  4e-87  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  45.1 
 
 
397 aa  322  5e-87  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  45.6 
 
 
373 aa  322  5e-87  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  45.07 
 
 
379 aa  322  6e-87  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  44.81 
 
 
377 aa  322  7e-87  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  45.04 
 
 
393 aa  322  7e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  46.05 
 
 
382 aa  322  8e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  44.36 
 
 
389 aa  322  8e-87  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  43.9 
 
 
380 aa  321  9.999999999999999e-87  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_004578  PSPTO_4502  carbamoyl-phosphate synthase, small subunit  46.24 
 
 
378 aa  321  9.999999999999999e-87  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.723109  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  47.35 
 
 
356 aa  321  9.999999999999999e-87  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  44.76 
 
 
389 aa  321  9.999999999999999e-87  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  45.79 
 
 
382 aa  321  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  44.88 
 
 
390 aa  322  9.999999999999999e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  44.88 
 
 
390 aa  322  9.999999999999999e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  45.1 
 
 
396 aa  320  1.9999999999999998e-86  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0203745 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  45.77 
 
 
376 aa  320  1.9999999999999998e-86  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  45.87 
 
 
381 aa  320  1.9999999999999998e-86  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  44.33 
 
 
397 aa  319  3.9999999999999996e-86  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  45.72 
 
 
379 aa  319  5e-86  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4192  carbamoyl phosphate synthase small subunit  44.85 
 
 
378 aa  319  5e-86  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  45.55 
 
 
387 aa  319  5e-86  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_009512  Pput_4590  carbamoyl phosphate synthase small subunit  46.63 
 
 
386 aa  318  6e-86  Pseudomonas putida F1  Bacteria  normal  normal  0.740896 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  46.52 
 
 
379 aa  319  6e-86  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_010322  PputGB1_4725  carbamoyl phosphate synthase small subunit  46.63 
 
 
378 aa  319  6e-86  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
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