| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2615 |
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| Symbol | |
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| ID | 7972377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2759098 |
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| End bp | 2760267 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793203 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_002944506 |
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| Protein GI | 239815596 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.218889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTTTGT CTCTCAAGGG AAGTTTCCCG CCCGCCATCC TGGCGCTCGC AGACGGCACG
GTCTTTCAAG GCAATTCGAT CGGAGCCGCC GGCTCCACGA CCGGCGAAGT GGTGTTCAAC
ACCGCCATGA CCGGTTACCA GGAAATCCTC ACCGACCCGA GTTACTGCCA GCAGATCGTG
ACGCTCACGT ATCCGCACAT CGGCAACTAC GGCGTCAACG GGGAAGACAT CGAAGCCGAC
AAGATCCATG CCGCGGGCCT GATCATCAAG GACCTGCCCC TCGTCGCCTC CAACTTCCGC
AAGACCGCCA CGCTGAGCGA ATACCTCGTG GCCGGCAAGA CGGTGGCCAT CGCGAACATC
GACACCCGCA AGCTCACGCG CCACCTGCGC ACCCACGGCG CGCAGAACGG CTGCATCCTG
GGCCTGGCCG CGGGCGAGGC CGTGACGCAG GCGCTGGTCG ACAAGGCCAT TGCCGCCGCC
AAGGCCGCGC CCAGCATGGC CGGGCTCGAC CTCGCCAAGG TGGTGTCGGT CACGCAGACC
TACGAATGGA CCGAGACCGA ATGGAAGCTG GGCGCGGGCT ACGGCGTGCA GATCACGCCC
AAGTTCCACG TGGTGGCCTT CGACTACGGC GTCAAGAAGA ACATCCTGCG CATGATCGCG
CAGCGCGGTG CGCGCATCAC CGTGGTGCCG GCGCAGACGC CCGCGGCCGA CGTGCTCAAG
CTCAAGCCCG ACGGCATCTT CCTGGCCAAT GGCCCGGGCG ACCCGGAGCC CTGCGACTAC
GCCATCAGCG CGGTCAAGGA ACTGATCGAG ACCGGCATTC CCACCTTCGG CATCTGCCTG
GGCCACCAGA TCATGGCGCT GGCCTCGGGC GCAAAGACCT TCAAGATGAA GTTCGGCCAC
CATGGCGCGA ACCATCCGGT GAAGGACCTG GACGACGGCC GAGTGAGCAT CACCAGCCAG
AACCACGGCT TCGCGGTCGA CGAGAAGTCG CTGCCCGCCA ACCTGCGCGC GACCCACATC
AGCCTGTTCG ACAACACGCT GCAGGGCCTT GCGCGCACCG ACAAGCCGGC GTTCTGCTTC
CAGGGCCACC CGGAAGCCTC GCCCGGCCCG CACGACATCG GCTACCTGTT CGACCGCTTC
ACCGCGCTCA TGGAGCAGGC ACGTGGCTGA
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| Protein sequence | MLLSLKGSFP PAILALADGT VFQGNSIGAA GSTTGEVVFN TAMTGYQEIL TDPSYCQQIV
TLTYPHIGNY GVNGEDIEAD KIHAAGLIIK DLPLVASNFR KTATLSEYLV AGKTVAIANI
DTRKLTRHLR THGAQNGCIL GLAAGEAVTQ ALVDKAIAAA KAAPSMAGLD LAKVVSVTQT
YEWTETEWKL GAGYGVQITP KFHVVAFDYG VKKNILRMIA QRGARITVVP AQTPAADVLK
LKPDGIFLAN GPGDPEPCDY AISAVKELIE TGIPTFGICL GHQIMALASG AKTFKMKFGH
HGANHPVKDL DDGRVSITSQ NHGFAVDEKS LPANLRATHI SLFDNTLQGL ARTDKPAFCF
QGHPEASPGP HDIGYLFDRF TALMEQARG
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