More than 300 homologs were found in PanDaTox collection
for query gene Coch_0275 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0275  carbamoyl phosphate synthase small subunit  100 
 
 
366 aa  763    Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000180913  n/a   
 
 
-
 
NC_014230  CA2559_05860  carbamoyl-phosphate synthase small subunit  68.66 
 
 
373 aa  540  9.999999999999999e-153  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.261865  n/a   
 
 
-
 
NC_009441  Fjoh_0369  carbamoyl phosphate synthase small subunit  65.75 
 
 
372 aa  519  1e-146  Flavobacterium johnsoniae UW101  Bacteria  normal  0.528508  n/a   
 
 
-
 
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  60.71 
 
 
365 aa  476  1e-133  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_013061  Phep_0705  carbamoyl phosphate synthase small subunit  59.44 
 
 
370 aa  469  1.0000000000000001e-131  Pedobacter heparinus DSM 2366  Bacteria  normal  0.274558  normal 
 
 
-
 
NC_013730  Slin_5758  carbamoyl-phosphate synthase, small subunit  57.38 
 
 
367 aa  445  1.0000000000000001e-124  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1645  carbamoyl phosphate synthase small subunit  55.15 
 
 
369 aa  442  1e-123  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  56.35 
 
 
368 aa  441  1e-123  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  54.67 
 
 
379 aa  375  1e-103  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  45.5 
 
 
391 aa  343  2e-93  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  49.21 
 
 
386 aa  340  2e-92  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  46.84 
 
 
379 aa  339  5e-92  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  46.46 
 
 
389 aa  337  9.999999999999999e-92  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  48.68 
 
 
386 aa  336  3.9999999999999995e-91  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  46.36 
 
 
381 aa  335  9e-91  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  47.99 
 
 
388 aa  334  1e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  46.05 
 
 
380 aa  333  2e-90  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  46.05 
 
 
380 aa  333  2e-90  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  46.11 
 
 
387 aa  333  3e-90  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  47.45 
 
 
392 aa  333  3e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  45.65 
 
 
377 aa  333  4e-90  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  45.87 
 
 
398 aa  332  7.000000000000001e-90  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.4 
 
 
384 aa  331  1e-89  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  48.88 
 
 
356 aa  330  2e-89  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  47.55 
 
 
373 aa  330  2e-89  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  45.41 
 
 
380 aa  330  3e-89  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  47.07 
 
 
390 aa  329  4e-89  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  48.38 
 
 
374 aa  329  4e-89  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  45.82 
 
 
381 aa  329  4e-89  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  47.07 
 
 
390 aa  329  4e-89  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  45.01 
 
 
381 aa  329  5.0000000000000004e-89  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  45.6 
 
 
382 aa  329  6e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  46.28 
 
 
379 aa  328  7e-89  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  44.56 
 
 
385 aa  328  8e-89  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  47.2 
 
 
379 aa  328  1.0000000000000001e-88  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0713  carbamoyl phosphate synthase small subunit  47.58 
 
 
382 aa  328  1.0000000000000001e-88  Serratia proteamaculans 568  Bacteria  normal  normal  0.123455 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  45.67 
 
 
388 aa  328  1.0000000000000001e-88  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  46.3 
 
 
386 aa  328  1.0000000000000001e-88  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  46.72 
 
 
366 aa  327  2.0000000000000001e-88  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  45.55 
 
 
386 aa  327  2.0000000000000001e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  47.28 
 
 
376 aa  327  2.0000000000000001e-88  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  46.03 
 
 
386 aa  326  3e-88  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  46.03 
 
 
386 aa  326  3e-88  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  47.81 
 
 
381 aa  326  4.0000000000000003e-88  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  45.74 
 
 
378 aa  326  4.0000000000000003e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  46.58 
 
 
416 aa  326  4.0000000000000003e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_42940  carbamoyl phosphate synthase small subunit  45.74 
 
 
378 aa  325  6e-88  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  47.85 
 
 
389 aa  325  6e-88  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  45.48 
 
 
382 aa  325  7e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  45.43 
 
 
392 aa  325  7e-88  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  45.43 
 
 
392 aa  325  7e-88  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  46.09 
 
 
390 aa  325  9e-88  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  47.81 
 
 
380 aa  324  1e-87  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  45.99 
 
 
379 aa  324  1e-87  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  46.24 
 
 
383 aa  325  1e-87  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  47.54 
 
 
369 aa  323  2e-87  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_012912  Dd1591_0554  carbamoyl-phosphate synthase, small subunit  45.48 
 
 
381 aa  324  2e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  45.21 
 
 
378 aa  324  2e-87  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  47.06 
 
 
376 aa  324  2e-87  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  46.22 
 
 
369 aa  323  3e-87  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  45.07 
 
 
386 aa  323  3e-87  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  44.76 
 
 
386 aa  323  3e-87  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  44.27 
 
 
381 aa  323  3e-87  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  45.19 
 
 
392 aa  323  3e-87  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  45.43 
 
 
440 aa  323  3e-87  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  44.88 
 
 
385 aa  323  4e-87  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  44.76 
 
 
391 aa  323  4e-87  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  46.24 
 
 
391 aa  323  4e-87  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  45.74 
 
 
382 aa  323  4e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  46.05 
 
 
389 aa  323  4e-87  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  46.24 
 
 
391 aa  322  5e-87  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  45.21 
 
 
387 aa  322  6e-87  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  46.77 
 
 
380 aa  322  8e-87  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0708  carbamoyl phosphate synthase small subunit  45.72 
 
 
386 aa  322  8e-87  Pseudomonas putida W619  Bacteria  normal  0.44923  normal  0.0111499 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  45.38 
 
 
379 aa  321  9.999999999999999e-87  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  44.97 
 
 
386 aa  321  9.999999999999999e-87  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  44.74 
 
 
381 aa  321  9.999999999999999e-87  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  45.58 
 
 
383 aa  321  9.999999999999999e-87  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  46.17 
 
 
381 aa  320  1.9999999999999998e-86  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  45.67 
 
 
384 aa  320  1.9999999999999998e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  45.97 
 
 
391 aa  321  1.9999999999999998e-86  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  46.05 
 
 
401 aa  320  1.9999999999999998e-86  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  44.74 
 
 
381 aa  320  1.9999999999999998e-86  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  45.7 
 
 
386 aa  320  1.9999999999999998e-86  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_007984  BCI_0559  carbamoyl-phosphate synthase, small subunit  44.5 
 
 
381 aa  321  1.9999999999999998e-86  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  44.97 
 
 
386 aa  320  1.9999999999999998e-86  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  45.04 
 
 
378 aa  320  3e-86  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  46.11 
 
 
393 aa  320  3e-86  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  45.43 
 
 
391 aa  320  3e-86  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  45.43 
 
 
382 aa  319  3.9999999999999996e-86  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_009439  Pmen_3621  carbamoyl phosphate synthase small subunit  45.03 
 
 
382 aa  319  3.9999999999999996e-86  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  44.85 
 
 
382 aa  319  3.9999999999999996e-86  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  46.47 
 
 
378 aa  319  5e-86  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  45.6 
 
 
378 aa  319  5e-86  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  44.68 
 
 
379 aa  319  5e-86  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  45.9 
 
 
381 aa  318  6e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  45.63 
 
 
369 aa  318  6e-86  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  45.9 
 
 
381 aa  318  7e-86  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  45.9 
 
 
381 aa  318  7e-86  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  45.9 
 
 
381 aa  318  7e-86  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
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