Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3454 |
Symbol | carA |
ID | 5384640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3892954 |
End bp | 3894129 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640866467 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001402409 |
Protein GI | 153948324 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAGT CAGCGCTATT GGTTCTCGAA GACGGAACCC AATTCCACGG TCGGGCCATC GGGGCAGAAG GTACGGCAGT AGGGGAAGTG GTCTTCAATA CGTCGATGAC CGGTTATCAA GAAATCCTCA CTGATCCTTC CTACTCCCGC CAGATTGTTA CTCTTACTTA TCCTCATATC GGCAATGTCG GCACTAATGC CTCCGATGAA GAATCCTCTG CAGTACACGC CCAAGGTCTT GTTATTCGCG ACCTGCCATT GATTGCCAGC AACTACCGTA ATGAAGAAGG CTTATCCGAG TATCTCAAGC GGCACAATAT TGTGGCGATT GCCGATATCG ATACTCGTAA GCTGACTCGC TTGCTGCGCG AAAAAGGAGC ACAGAACGGC TGCATTATTG TTGGGGAGTT GTCTGACGCG GCCCTGGCAT TGGAAAAAGC GAAAGCATTT CCAGGCTTGA AAGGGATGGA TCTGGCGAAA GAAGTGACCA CCAAAGAGAT GTATCAGTGG CTGCAAGGCA GTTGGACGCT GGAAGGTGAT TTACCTGCGG CGAAACAACC AGAAAATTTG CCATTCCATG TGGTGGCTTA CGATTATGGT GTGAAGCGTA ATATCCTGCG TATGCTGGTT GATCGCGGTT GCCGTCTGAC CGTTGTTCCA GCGCAGACAC CCGCTGAAGA CGTTCTGAAA CTGAATCCAG ATGGCATCTT CTTATCCAAT GGTCCTGGGG ACCCAGAACC ATGCGATTAC GCGATCACGG CCATCAAACG CTTCCTGGAA ACGGATATTC CGGTATTCGG CATCTGTCTG GGCCACCAAT TGCTGGCGCT GGCCAGTGGC GCTAAAACAG TAAAAATGAA GTTCGGTCAC CATGGGGGTA ACCATCCGGT GAAAGATCTG GATGCTAGCT GTGTGATGAT TACCGCGCAA AACCATGGCT TCGCCGTTGA TGAAACCTCA TTGCCATCCA ACCTGCGTAC TACGCATGTC TCTTTATTTG ATGGTTCTCT GCAAGGGCTT CACCGTACAG ATAAAGCAGC GTTCAGCTTC CAGGGGCATC CAGAAGCCAG CCCCGGCCCG CATGATGCCG CGCCATTGTT TGATCATTTT ATCGAACTGA TTGAGGCTTA CCGAGCTTCA TCCGTGAGTC TTAACCGTAG TAACAGCCAT AAATAA
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Protein sequence | MIKSALLVLE DGTQFHGRAI GAEGTAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI GNVGTNASDE ESSAVHAQGL VIRDLPLIAS NYRNEEGLSE YLKRHNIVAI ADIDTRKLTR LLREKGAQNG CIIVGELSDA ALALEKAKAF PGLKGMDLAK EVTTKEMYQW LQGSWTLEGD LPAAKQPENL PFHVVAYDYG VKRNILRMLV DRGCRLTVVP AQTPAEDVLK LNPDGIFLSN GPGDPEPCDY AITAIKRFLE TDIPVFGICL GHQLLALASG AKTVKMKFGH HGGNHPVKDL DASCVMITAQ NHGFAVDETS LPSNLRTTHV SLFDGSLQGL HRTDKAAFSF QGHPEASPGP HDAAPLFDHF IELIEAYRAS SVSLNRSNSH K
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