| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3401 |
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| Symbol | |
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| ID | 5373693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4039193 |
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| End bp | 4040368 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831661 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001367591 |
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| Protein GI | 153001910 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00720177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC TGTATTCTCT
GGCACAGCAA TTGGTGCCGA TGGTCTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG
ACAGGTTACC AAGAAATTTT AACTGATCCA TCCTACTCAC GCCAGATTGT AACATTAACC
TACCCACACA TAGGCAACAC TGGTACCAAT GATGAAGATG TTGAATCCGA TGGGGTTCAC
GCTTGTGGTC TTATCATTCG TGATCTTCCG CTCATCGCAA GTAGTTTCCG CAATCAACAA
AGCTTAAGTG ATTATCTCAA AGCGAACAAT GTCGTTGGCA TAGCAGATAT CGATACCCGC
AAGTTAACTC GTATTCTCCG TGAAAAAGGT GCACAAGCCG GTTGTATTAT GGCAGGTGCA
GATTTAGACG AAGCAAAAGC GCTCGCCGCT GCCAAAGCCT TCCCCGGTTT AAAAGGCATG
GATCTCGCTA AAGAAGTCAC AACTAAAGCG GCCTATCCAT GGCGCAAAGG TAGCTGGCGT
TTAGTGGGCG GTTTACCTGC AGATACGCCA GTAAATGAGC TTAAATACAA AGTAGTAGCC
TACGACTACG GCGTTAAGCA AAACATTCTG CGTATGTTAG TGGACCGCGG TTGCGACGTC
ACTGTTGTGC CAGCTAAAAC CTCTGCCGCC GACGTGCTGG CGATGAATCC CGATGGTGTG
TTCCTTTCGA ACGGCCCTGG CGATCCAGAA CCATGCGATT ACGCAATTGA AGCGATTCAA
CAGATCCTGA AAACCGACAC ACCGATTTTC GGTATCTGTT TAGGTCATCA GTTGTTGGCT
CTGGCCTCAG GTGCAAAAAC CTTAAAGATG AAGTTTGGTC ACCATGGTGC AAACCACCCA
GTGAGCAACA TCGAGAAAGG TAACGTGATG ATCACCAGCC AAAACCACGG TTTTGCTGCC
GATGAAACCA CGCTACCCGC CAACATTAAG GTGACGCATA AGTCGCTGTT TGATGGTTCA
CTGCAAGGTA TCCATCTTAC GGACAAACCT GCGTTCAGCT TCCAAGGTCA CCCTGAAGCG
AGCCCTGGCC CGAACGATGC CGCACCTCTG TTCGATCACT TTATCGAGCT AATCGAACAC
TATCGTCTTG TAACGAAACG TCAGAACGCT AAGTAA
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| Protein sequence | MEVALTKSAL LVLEDGTVFS GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT
YPHIGNTGTN DEDVESDGVH ACGLIIRDLP LIASSFRNQQ SLSDYLKANN VVGIADIDTR
KLTRILREKG AQAGCIMAGA DLDEAKALAA AKAFPGLKGM DLAKEVTTKA AYPWRKGSWR
LVGGLPADTP VNELKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA DVLAMNPDGV
FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP
VSNIEKGNVM ITSQNHGFAA DETTLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA
SPGPNDAAPL FDHFIELIEH YRLVTKRQNA K
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