More than 300 homologs were found in PanDaTox collection
for query gene CHU_3134 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  100 
 
 
365 aa  759    Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_013730  Slin_5758  carbamoyl-phosphate synthase, small subunit  69.34 
 
 
367 aa  526  1e-148  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  65.75 
 
 
368 aa  516  1.0000000000000001e-145  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0705  carbamoyl phosphate synthase small subunit  66.86 
 
 
370 aa  511  1e-143  Pedobacter heparinus DSM 2366  Bacteria  normal  0.274558  normal 
 
 
-
 
NC_013132  Cpin_1645  carbamoyl phosphate synthase small subunit  62.71 
 
 
369 aa  489  1e-137  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0275  carbamoyl phosphate synthase small subunit  60.71 
 
 
366 aa  476  1e-133  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000180913  n/a   
 
 
-
 
NC_009441  Fjoh_0369  carbamoyl phosphate synthase small subunit  59.07 
 
 
372 aa  470  1.0000000000000001e-131  Flavobacterium johnsoniae UW101  Bacteria  normal  0.528508  n/a   
 
 
-
 
NC_014230  CA2559_05860  carbamoyl-phosphate synthase small subunit  58.13 
 
 
373 aa  465  9.999999999999999e-131  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.261865  n/a   
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  55.37 
 
 
379 aa  395  1e-109  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  49.58 
 
 
366 aa  364  1e-99  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  48.36 
 
 
371 aa  357  9.999999999999999e-98  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  48.22 
 
 
369 aa  357  1.9999999999999998e-97  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  48.09 
 
 
369 aa  357  2.9999999999999997e-97  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  48.62 
 
 
367 aa  354  1e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  48.66 
 
 
391 aa  355  1e-96  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  46.83 
 
 
367 aa  353  2.9999999999999997e-96  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  47.24 
 
 
369 aa  351  1e-95  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  48.25 
 
 
386 aa  350  2e-95  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  48.37 
 
 
386 aa  348  7e-95  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  45.81 
 
 
389 aa  340  2e-92  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  46.34 
 
 
398 aa  340  2.9999999999999998e-92  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  47.35 
 
 
372 aa  339  5e-92  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  46.42 
 
 
386 aa  337  1.9999999999999998e-91  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  46.63 
 
 
379 aa  337  1.9999999999999998e-91  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.38 
 
 
384 aa  336  2.9999999999999997e-91  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  46.09 
 
 
374 aa  336  2.9999999999999997e-91  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  46.09 
 
 
391 aa  336  3.9999999999999995e-91  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  46.09 
 
 
382 aa  336  3.9999999999999995e-91  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  47.31 
 
 
381 aa  336  3.9999999999999995e-91  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  46.78 
 
 
359 aa  335  7.999999999999999e-91  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  47.03 
 
 
381 aa  335  9e-91  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  45.41 
 
 
414 aa  334  1e-90  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  46.17 
 
 
381 aa  334  1e-90  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  47.44 
 
 
382 aa  334  1e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  45.82 
 
 
382 aa  334  1e-90  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  45.82 
 
 
382 aa  334  2e-90  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  45.91 
 
 
388 aa  334  2e-90  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  46.63 
 
 
379 aa  333  2e-90  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  46.28 
 
 
416 aa  334  2e-90  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  46.54 
 
 
385 aa  333  3e-90  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  46.49 
 
 
381 aa  333  3e-90  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  46.03 
 
 
377 aa  332  4e-90  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  45.55 
 
 
382 aa  332  5e-90  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  45.82 
 
 
382 aa  332  6e-90  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007984  BCI_0559  carbamoyl-phosphate synthase, small subunit  46.22 
 
 
381 aa  332  6e-90  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  46.2 
 
 
372 aa  332  7.000000000000001e-90  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  46.15 
 
 
391 aa  332  7.000000000000001e-90  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  46.15 
 
 
386 aa  332  7.000000000000001e-90  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  46.54 
 
 
388 aa  331  1e-89  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  44.62 
 
 
387 aa  331  1e-89  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  45.62 
 
 
386 aa  330  2e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  46.63 
 
 
387 aa  330  2e-89  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  45.36 
 
 
380 aa  330  2e-89  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  45.36 
 
 
380 aa  330  2e-89  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  46.76 
 
 
390 aa  330  3e-89  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  45.99 
 
 
373 aa  330  3e-89  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  45.89 
 
 
386 aa  329  4e-89  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  44.59 
 
 
416 aa  329  4e-89  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  45.53 
 
 
386 aa  329  4e-89  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  45.99 
 
 
373 aa  329  4e-89  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  45.36 
 
 
397 aa  329  4e-89  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  46.49 
 
 
381 aa  329  5.0000000000000004e-89  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  45.21 
 
 
379 aa  329  6e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  44.8 
 
 
381 aa  329  6e-89  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  45.89 
 
 
386 aa  328  7e-89  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  45.11 
 
 
376 aa  328  8e-89  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  46.17 
 
 
385 aa  328  1.0000000000000001e-88  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  46.63 
 
 
391 aa  327  1.0000000000000001e-88  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  45.68 
 
 
381 aa  327  1.0000000000000001e-88  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  47.03 
 
 
381 aa  328  1.0000000000000001e-88  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  46.63 
 
 
391 aa  328  1.0000000000000001e-88  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_009832  Spro_0713  carbamoyl phosphate synthase small subunit  46.09 
 
 
382 aa  328  1.0000000000000001e-88  Serratia proteamaculans 568  Bacteria  normal  normal  0.123455 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  45.5 
 
 
378 aa  327  1.0000000000000001e-88  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  44.71 
 
 
383 aa  327  2.0000000000000001e-88  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  46.63 
 
 
391 aa  327  2.0000000000000001e-88  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  46.38 
 
 
379 aa  327  2.0000000000000001e-88  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  45.62 
 
 
386 aa  327  2.0000000000000001e-88  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  45.62 
 
 
386 aa  327  2.0000000000000001e-88  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  44.74 
 
 
382 aa  327  3e-88  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  44.74 
 
 
382 aa  327  3e-88  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  45.9 
 
 
379 aa  327  3e-88  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  44.74 
 
 
382 aa  327  3e-88  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  44.74 
 
 
382 aa  327  3e-88  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  44.95 
 
 
384 aa  326  3e-88  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  46.51 
 
 
380 aa  326  3e-88  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  44.74 
 
 
382 aa  327  3e-88  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00035  hypothetical protein  44.74 
 
 
382 aa  327  3e-88  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  44.74 
 
 
382 aa  327  3e-88  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  44.74 
 
 
391 aa  326  3e-88  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  44.74 
 
 
382 aa  326  4.0000000000000003e-88  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  46.22 
 
 
378 aa  326  4.0000000000000003e-88  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  45.14 
 
 
390 aa  326  5e-88  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  46.9 
 
 
382 aa  325  5e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  46.17 
 
 
440 aa  325  5e-88  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  44.91 
 
 
397 aa  324  1e-87  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  44.57 
 
 
393 aa  324  1e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  45.95 
 
 
392 aa  323  3e-87  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  45.16 
 
 
373 aa  323  3e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_012912  Dd1591_0554  carbamoyl-phosphate synthase, small subunit  46.63 
 
 
381 aa  323  3e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  45.95 
 
 
392 aa  323  4e-87  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
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