Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3134 |
Symbol | carA |
ID | 4183612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3582917 |
End bp | 3584014 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073122 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_679716 |
Protein GI | 110639507 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00309954 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.624164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC ACGAACAAAA AGAAGCATAT TTAATGCTTG AAGATGGTAC CTGGTACAAA GGTATTGCAG TTGGTAAAAT CGGGACTACA TCAGGCGAGA TTTGTTTCAA TACAGGGATG ACAGGGTATC AGGAAATTTA TACCGATCCG TCGTATTATG GGCAAATCAT TGTAAACACT ACAAGCCATA TTGGAAATTA TGGTGTTAAA GAAGACGAAC AGGAATCTGC CGGTGTTAAA TTCAGCGGAT TGGTTTGCAG AAATTTTTCA GAAATGTTTT CACGGAAGGA CGGCGATGGA TCACTTCAGG CTTACTTCGA GAAAAATAAT ATTGTAGGTA TCAGCGATGT TGATACACGT GAACTGGTTC GTTATATCCG TTCTAAAGGA ACAATGAATG CAGTGATTTC TTCTGAAATT TTAGATGTGG AAAAACTGAA AGAAGAAGTT AAAAAGGTTC CTTCTATGAA AGGCCTTGAA CTTTCAAGCA GAGTTTCTAC TAAAGAAAGT TATTTCTTAG GAAATCCGGA TGCTAAATAC AAAGTGGCTG TATTGGATCT TGGTGTTAAA ACCAACATTT TAAAAAACCT TACAGACAGA GATTGTTACT TAAAAGTATT CCCGGCTAAG ACAACCTATG CTGAAATGAA GCAATGGTCA CCAAATGGTT ATTTTATTTC TAATGGGCCT GGTGACCCAG CTGTAACAAG CTATGCAATT GATACGGTAA AAAATATTTT ATCTGAAAAC AGACCGATGT TTGGAATTTG CCTGGGGCAT CAGATCTTAG CGGAAGCAAA TGGTATTCCG ACATATAAAA TGCCAAATGG CCACAGAGGT TTGAATCATC CGGTAAAAAA CTTAATTTCG GGTTTGTCTG AAGTGACTTC TCAAAATCAC GGATTTGCAG TGGATGCAAA TGCAGTGCCT AAGGACAGCA ATGTTGAGAT CACACACATA AACTTAAATG ATAATACAGT AGAAGGTATT CGGTTGAAAG ATAAGAATGC ATTCTCTGTA CAGTATCACC CTGAGTCTTC TCCGGGGCCA CATGATTCCA GATACTTATT TGATCAATTT GTATCAAACT TAAACTAG
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Protein sequence | MKLHEQKEAY LMLEDGTWYK GIAVGKIGTT SGEICFNTGM TGYQEIYTDP SYYGQIIVNT TSHIGNYGVK EDEQESAGVK FSGLVCRNFS EMFSRKDGDG SLQAYFEKNN IVGISDVDTR ELVRYIRSKG TMNAVISSEI LDVEKLKEEV KKVPSMKGLE LSSRVSTKES YFLGNPDAKY KVAVLDLGVK TNILKNLTDR DCYLKVFPAK TTYAEMKQWS PNGYFISNGP GDPAVTSYAI DTVKNILSEN RPMFGICLGH QILAEANGIP TYKMPNGHRG LNHPVKNLIS GLSEVTSQNH GFAVDANAVP KDSNVEITHI NLNDNTVEGI RLKDKNAFSV QYHPESSPGP HDSRYLFDQF VSNLN
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