| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0275 |
|---|
| Symbol | |
|---|
| ID | 8366681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 355537 |
|---|
| End bp | 356637 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644982696 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_003140399 |
|---|
| Protein GI | 256819120 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000180913 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATC AACAAAAGAA AAAAGCGGTA TTACTCCTTG CTGATGGCAC TGCCTTTTAT
GGTAAAAGCG TTGGCTATGA AGGTACTGCT TTTGGTGAAG TGTGTTTCAA TACGGGTATG
ACGGGCTATC AGGAAATATT TACTGACCCT TCGTACTTTG GTCAGATTAT GGTGATGACC
AATGCTCATA TCGGCAATTA CGGTATCTGT GAAGACGACA ACGAATCGAA TGGTATGAAA
ATTGCAGGGC TGGTATGTAG AAATTTTAGT TATGATGCCT CCCGTGCTGT TGCCGAGGAA
ACCTTGAAAG ACTTTTTAGA CCGTAACCAC TTGGTAGCCA TTTGTGAAGT AGATACTCGC
GCTTTGGTGA GTTATATTCG TGACAATGGC TCGATGAACG CTGTTATTTC CACAGAAACT
GACGATTTAG CACTGCTCAA AGCTCGCTTA AATGAGATTC CTAATATGAA AGGTTTAGAA
TTGGCATCGA AAGTGTCGGT TACTGAACCT TATTTTTTTG GCAATCCAGA AGCGAAGTAC
AAAGTAGCAG CACTCGATTT CGGCATCAAG AAAAATATCT TGCGCAACTT AGCAGCCCGT
GATATGTACA TCAAAGTATT TCCGTACAAC ACGCCTTTGG CTGAGCTCAA AGCGTGGAAC
CCCAATGGCT ATTTCTTGTC TAATGGACCT GGCGATCCCG AACCGCTTAC CGAGGTCATT
GCTCAAGTAA AACAAATGAT TGATGAGGAT TTACCTATCT TTGGCATTTG CTTAGGACAT
CAAATTATTG CATTAGCCAA TGGCATTAGT ACTTATAAAA TGCACAACGG TCACCGCGGT
ATCAACCACC CTGTGAAGAA TTTGCTTACA GGTAAGGACG AGATTACCTC TCAGAATCAC
GGGTTTGCTG TGAATAGAGC AGAGGCAGAA GCTAACCCTA ATGTGGAGAT CACGCATACC
CACCTAAACG ACAATACTGT GATGGGTTTA CGAGTGAAAG GCAAGAAATG TTTCAGTGTG
CAGTATCACC CCGAAGCCGC TCCTGGTCCT AATGATGCGA CGTATTTGTT TGACCAATTT
GTGGAGCAAT TGAGGAATTA G
|
|---|
| Protein sequence | MKYQQKKKAV LLLADGTAFY GKSVGYEGTA FGEVCFNTGM TGYQEIFTDP SYFGQIMVMT
NAHIGNYGIC EDDNESNGMK IAGLVCRNFS YDASRAVAEE TLKDFLDRNH LVAICEVDTR
ALVSYIRDNG SMNAVISTET DDLALLKARL NEIPNMKGLE LASKVSVTEP YFFGNPEAKY
KVAALDFGIK KNILRNLAAR DMYIKVFPYN TPLAELKAWN PNGYFLSNGP GDPEPLTEVI
AQVKQMIDED LPIFGICLGH QIIALANGIS TYKMHNGHRG INHPVKNLLT GKDEITSQNH
GFAVNRAEAE ANPNVEITHT HLNDNTVMGL RVKGKKCFSV QYHPEAAPGP NDATYLFDQF
VEQLRN
|
|---|
| |