More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2749 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  100 
 
 
578 aa  1152    Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  75 
 
 
579 aa  453  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  74.37 
 
 
579 aa  438  1e-121  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  74.76 
 
 
589 aa  436  1e-121  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  74.18 
 
 
586 aa  432  1e-120  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  77.74 
 
 
596 aa  431  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  73.29 
 
 
532 aa  427  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  75.59 
 
 
583 aa  415  1e-114  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  74.83 
 
 
552 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  75.95 
 
 
542 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  70.25 
 
 
537 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  70.68 
 
 
573 aa  404  1e-111  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  73.45 
 
 
578 aa  399  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  71.75 
 
 
584 aa  395  1e-109  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  73.36 
 
 
580 aa  397  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  74.91 
 
 
511 aa  394  1e-108  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  74.2 
 
 
592 aa  392  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  72.82 
 
 
527 aa  395  1e-108  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  68.33 
 
 
589 aa  391  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  70.98 
 
 
557 aa  384  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  67.67 
 
 
515 aa  379  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  73.94 
 
 
598 aa  382  1e-104  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  69.36 
 
 
653 aa  375  1e-103  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.17 
 
 
471 aa  374  1e-102  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  69.36 
 
 
653 aa  375  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  70.81 
 
 
537 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  69.15 
 
 
659 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
535 aa  363  3e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  69.28 
 
 
614 aa  363  6e-99  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  68.29 
 
 
532 aa  361  2e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  67 
 
 
553 aa  359  7e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  64.82 
 
 
559 aa  358  9.999999999999999e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  58.06 
 
 
519 aa  359  9.999999999999999e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
581 aa  357  2.9999999999999997e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  64.5 
 
 
517 aa  356  7.999999999999999e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_007908  Rfer_2789  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
529 aa  355  1e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.017789  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  60.84 
 
 
597 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  54.87 
 
 
585 aa  352  1e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
554 aa  351  2e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  64.29 
 
 
539 aa  350  3e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.61 
 
 
564 aa  348  1e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  60 
 
 
566 aa  348  2e-94  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  67.12 
 
 
642 aa  347  2e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  61.04 
 
 
618 aa  347  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  68.26 
 
 
589 aa  346  6e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  61.31 
 
 
579 aa  346  8e-94  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  64.31 
 
 
613 aa  344  2e-93  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  46.72 
 
 
627 aa  344  2e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  63.31 
 
 
612 aa  343  4e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
519 aa  343  5e-93  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  60.66 
 
 
512 aa  342  2e-92  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
521 aa  341  2e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  60.84 
 
 
511 aa  341  2.9999999999999998e-92  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  60.84 
 
 
526 aa  341  2.9999999999999998e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  60.84 
 
 
546 aa  340  4e-92  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  60.84 
 
 
546 aa  340  5e-92  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  60.84 
 
 
546 aa  340  5e-92  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  60.84 
 
 
546 aa  340  5e-92  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  60.84 
 
 
546 aa  340  5e-92  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  62.38 
 
 
594 aa  339  5.9999999999999996e-92  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  46.25 
 
 
521 aa  339  9e-92  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
598 aa  338  9.999999999999999e-92  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  64.17 
 
 
572 aa  338  1.9999999999999998e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  41.2 
 
 
541 aa  338  1.9999999999999998e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  61.69 
 
 
752 aa  337  2.9999999999999997e-91  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  62.42 
 
 
515 aa  337  2.9999999999999997e-91  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  60.24 
 
 
559 aa  337  3.9999999999999995e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  53.23 
 
 
520 aa  337  5e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  61.66 
 
 
581 aa  336  5.999999999999999e-91  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  57.61 
 
 
560 aa  336  9e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.09 
 
 
515 aa  335  1e-90  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  58.61 
 
 
525 aa  335  2e-90  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  59.06 
 
 
589 aa  334  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  59.01 
 
 
536 aa  333  4e-90  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  63.67 
 
 
513 aa  333  5e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  57.3 
 
 
587 aa  332  1e-89  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  58.13 
 
 
547 aa  332  1e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  62.03 
 
 
705 aa  331  2e-89  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  55.9 
 
 
515 aa  331  2e-89  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
566 aa  331  2e-89  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  58.26 
 
 
580 aa  331  2e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.87 
 
 
585 aa  331  2e-89  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  59.26 
 
 
605 aa  331  2e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.01 
 
 
519 aa  331  3e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  59.31 
 
 
558 aa  331  3e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0033  methyl-accepting chemotaxis sensory transducer  58.67 
 
 
593 aa  330  4e-89  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.684678  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.34 
 
 
519 aa  330  5.0000000000000004e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.1 
 
 
513 aa  330  5.0000000000000004e-89  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  59.56 
 
 
611 aa  330  5.0000000000000004e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  62.1 
 
 
513 aa  330  5.0000000000000004e-89  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  64.01 
 
 
559 aa  330  5.0000000000000004e-89  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.06 
 
 
562 aa  330  5.0000000000000004e-89  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  59.81 
 
 
576 aa  330  5.0000000000000004e-89  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  59.31 
 
 
573 aa  329  7e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_010002  Daci_4524  methyl-accepting chemotaxis sensory transducer  58.96 
 
 
599 aa  329  7e-89  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  58.95 
 
 
605 aa  329  8e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  58.93 
 
 
775 aa  328  1.0000000000000001e-88  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  60.61 
 
 
544 aa  329  1.0000000000000001e-88  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  55.82 
 
 
554 aa  329  1.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.2 
 
 
598 aa  328  2.0000000000000001e-88  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
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