More than 300 homologs were found in PanDaTox collection
for query gene Franean1_3808 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_3808  LuxR family transcriptional regulator  100 
 
 		 268 aa  517  1e-146  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  50 
 
 		 213 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  57.79 
 
 		 207 aa  169  4e-41  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  57.69 
 
 		 207 aa  166  2.9999999999999998e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  56.25 
 
 		 230 aa  164  1.0000000000000001e-39  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  44.38 
 
 		 207 aa  141  9e-33  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0262091 
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  42.21 
 
 		 252 aa  122  7e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  45.28 
 
 		 207 aa  119  3.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  45.18 
 
 		 208 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  44 
 
 		 202 aa  109  6e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  51.8 
 
 		 206 aa  102  7e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  44.93 
 
 		 208 aa  96.3  5e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  33.16 
 
 		 232 aa  95.9  7e-19  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  38.22 
 
 		 215 aa  89  8e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  37.06 
 
 		 213 aa  85.9  7e-16  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  36.6 
 
 		 213 aa  84.3  0.000000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  33.56 
 
 		 303 aa  83.2  0.000000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.16 
 
 		 234 aa  82.8  0.000000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  40.71 
 
 		 216 aa  80.9  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  37.59 
 
 		 213 aa  80.9  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  29.22 
 
 		 216 aa  81.3  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  35.4 
 
 		 253 aa  80.5  0.00000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  38.3 
 
 		 219 aa  80.5  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.43 
 
 		 234 aa  80.1  0.00000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  38.41 
 
 		 225 aa  78.6  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.85 
 
 		 228 aa  78.2  0.0000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  40.26 
 
 		 222 aa  78.6  0.0000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.93 
 
 		 238 aa  77.8  0.0000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  33.51 
 
 		 237 aa  77.8  0.0000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  37.58 
 
 		 226 aa  77.8  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.93 
 
 		 250 aa  77.8  0.0000000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  30.71 
 
 		 210 aa  76.6  0.0000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  36.24 
 
 		 217 aa  76.6  0.0000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  32.14 
 
 		 210 aa  76.6  0.0000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  39.57 
 
 		 206 aa  75.9  0.0000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  32.37 
 
 		 210 aa  75.9  0.0000000000007  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  25.49 
 
 		 216 aa  75.9  0.0000000000007  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  27.21 
 
 		 237 aa  75.5  0.0000000000008  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  28.41 
 
 		 208 aa  75.5  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  38.99 
 
 		 226 aa  74.7  0.000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  35.21 
 
 		 233 aa  74.7  0.000000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.75 
 
 		 214 aa  74.7  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.56 
 
 		 241 aa  75.1  0.000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_006274  BCZK1321  response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  32.9 
 
 		 163 aa  74.7  0.000000000002  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  31.6 
 
 		 207 aa  74.3  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  32.9 
 
 		 163 aa  74.7  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  32.9 
 
 		 162 aa  74.7  0.000000000002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  32.37 
 
 		 210 aa  74.3  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  35.59 
 
 		 230 aa  73.9  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  32.37 
 
 		 210 aa  73.6  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  37.01 
 
 		 217 aa  73.6  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  35.59 
 
 		 230 aa  73.9  0.000000000003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  37.11 
 
 		 227 aa  73.9  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  37.28 
 
 		 219 aa  73.2  0.000000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  37.33 
 
 		 220 aa  73.2  0.000000000004  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  29.03 
 
 		 208 aa  72.4  0.000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  37.69 
 
 		 213 aa  72.4  0.000000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.16 
 
 		 213 aa  72.4  0.000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  28.2 
 
 		 216 aa  72  0.000000000008  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  35.71 
 
 		 217 aa  72.4  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  37.28 
 
 		 220 aa  72  0.000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  34.5 
 
 		 225 aa  72  0.000000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  36.23 
 
 		 207 aa  72  0.000000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  40.16 
 
 		 218 aa  71.6  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.96 
 
 		 216 aa  71.6  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.24 
 
 		 216 aa  71.2  0.00000000001  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  29.82 
 
 		 225 aa  71.6  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  31.69 
 
 		 218 aa  70.9  0.00000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  33.8 
 
 		 219 aa  70.9  0.00000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  36.96 
 
 		 222 aa  71.2  0.00000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  28.09 
 
 		 218 aa  71.2  0.00000000002  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.33 
 
 		 242 aa  70.1  0.00000000003  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007404  Tbd_2786  two component LuxR family transcriptional regulator  29.45 
 
 		 210 aa  70.1  0.00000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0443035  normal  0.922606 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  37.5 
 
 		 225 aa  70.5  0.00000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.000789071 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.5 
 
 		 218 aa  70.5  0.00000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.254077 
 
 
-
 
NC_011662  Tmz1t_4012  transcriptional regulator NarL  34.44 
 
 		 214 aa  70.1  0.00000000003  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  30.36 
 
 		 227 aa  70.5  0.00000000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  37.84 
 
 		 205 aa  69.7  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_3046  two component LuxR family transcriptional regulator  34.78 
 
 		 218 aa  69.7  0.00000000004  Mycobacterium sp. JLS  Bacteria  normal  0.826568  normal  0.671191 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.97 
 
 		 239 aa  70.1  0.00000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008146  Mmcs_3030  two component LuxR family transcriptional regulator  34.78 
 
 		 218 aa  69.7  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  0.640191  n/a   
 
 
-
 
NC_008705  Mkms_3089  two component LuxR family transcriptional regulator  34.78 
 
 		 218 aa  69.7  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  0.109155  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.39 
 
 		 229 aa  69.7  0.00000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  30.07 
 
 		 231 aa  69.3  0.00000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  35.71 
 
 		 211 aa  69.3  0.00000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  36.47 
 
 		 225 aa  69.3  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  36.97 
 
 		 216 aa  68.9  0.00000000007  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  29.07 
 
 		 225 aa  68.9  0.00000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  38.03 
 
 		 239 aa  68.9  0.00000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.377169 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  36.6 
 
 		 212 aa  68.9  0.00000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  36.96 
 
 		 235 aa  68.9  0.00000000009  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  33.11 
 
 		 213 aa  68.2  0.0000000001  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  37.28 
 
 		 214 aa  68.6  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
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