More than 300 homologs were found in PanDaTox collection
for query gene Bfae_00620 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_00620  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  100 
 
 
260 aa  502  1e-141  Brachybacterium faecium DSM 4810  Bacteria  normal  0.297652  n/a   
 
 
-
 
NC_012669  Bcav_4071  short-chain dehydrogenase/reductase SDR  64.8 
 
 
256 aa  284  1.0000000000000001e-75  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.254174 
 
 
-
 
NC_013757  Gobs_2446  short-chain dehydrogenase/reductase SDR  69.14 
 
 
246 aa  278  5e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0818672  n/a   
 
 
-
 
NC_013595  Sros_8214  short chain dehydrogenase  65.71 
 
 
248 aa  275  7e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6299  short-chain dehydrogenase/reductase SDR  60.41 
 
 
251 aa  273  2.0000000000000002e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.125126  normal 
 
 
-
 
NC_013093  Amir_0395  short-chain dehydrogenase/reductase SDR  68.16 
 
 
256 aa  269  4e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0761  short-chain dehydrogenase/reductase SDR  59.67 
 
 
253 aa  261  6e-69  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.562893  n/a   
 
 
-
 
NC_013131  Caci_1459  short-chain dehydrogenase/reductase SDR  65.45 
 
 
255 aa  261  8e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.843425  normal  0.851299 
 
 
-
 
NC_013131  Caci_6298  short-chain dehydrogenase/reductase SDR  56.33 
 
 
271 aa  256  2e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.1246  normal 
 
 
-
 
NC_009664  Krad_4194  short-chain dehydrogenase/reductase SDR  61.22 
 
 
252 aa  241  7e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.870685  normal  0.0785008 
 
 
-
 
NC_008148  Rxyl_0077  short-chain dehydrogenase/reductase SDR  45.12 
 
 
248 aa  182  4.0000000000000006e-45  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  41.06 
 
 
250 aa  178  7e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_3011  short-chain dehydrogenase/reductase SDR  43.9 
 
 
251 aa  178  8e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1486  short-chain dehydrogenase/reductase SDR  43.59 
 
 
241 aa  159  4e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.727774  normal 
 
 
-
 
NC_010338  Caul_1544  short-chain dehydrogenase/reductase SDR  41.74 
 
 
244 aa  157  2e-37  Caulobacter sp. K31  Bacteria  normal  normal  0.846723 
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  36.4 
 
 
252 aa  156  4e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_008686  Pden_1255  3-ketoacyl-(acyl-carrier-protein) reductase  40.41 
 
 
247 aa  155  6e-37  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  40.24 
 
 
258 aa  154  1e-36  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_007794  Saro_2429  short-chain dehydrogenase/reductase SDR  41.84 
 
 
246 aa  150  1e-35  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1040  short chain dehydrogenase  40.18 
 
 
253 aa  147  1.0000000000000001e-34  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4814  short-chain dehydrogenase/reductase SDR  41.43 
 
 
257 aa  147  1.0000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.19857  normal 
 
 
-
 
NC_009654  Mmwyl1_0865  short-chain dehydrogenase/reductase SDR  36.44 
 
 
244 aa  147  1.0000000000000001e-34  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.372052 
 
 
-
 
NC_008786  Veis_3594  short-chain dehydrogenase/reductase SDR  40.64 
 
 
261 aa  147  2.0000000000000003e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.806821  normal  0.214566 
 
 
-
 
NC_012850  Rleg_1601  short-chain dehydrogenase/reductase SDR  38.59 
 
 
258 aa  147  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  36.44 
 
 
254 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_013037  Dfer_5738  short-chain dehydrogenase/reductase SDR  34.52 
 
 
257 aa  146  3e-34  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.759988  normal  0.0474831 
 
 
-
 
NC_008043  TM1040_3393  short-chain dehydrogenase/reductase SDR  37.75 
 
 
252 aa  146  4.0000000000000006e-34  Ruegeria sp. TM1040  Bacteria  normal  normal  0.407663 
 
 
-
 
NC_009667  Oant_0317  short-chain dehydrogenase/reductase SDR  39.18 
 
 
244 aa  145  6e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.742877  n/a   
 
 
-
 
NC_013061  Phep_4018  short-chain dehydrogenase/reductase SDR  35.86 
 
 
254 aa  145  8.000000000000001e-34  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2455  short-chain dehydrogenase/reductase SDR  40.32 
 
 
251 aa  144  2e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000407954 
 
 
-
 
NC_010501  PputW619_1704  short chain dehydrogenase  36.86 
 
 
262 aa  143  3e-33  Pseudomonas putida W619  Bacteria  normal  0.771758  normal 
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  39.22 
 
 
255 aa  143  3e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_008752  Aave_1551  short-chain dehydrogenase/reductase SDR  39.27 
 
 
270 aa  142  4e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.2513  normal  0.363007 
 
 
-
 
NC_011894  Mnod_1178  short-chain dehydrogenase/reductase SDR  42.98 
 
 
262 aa  142  5e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  42.15 
 
 
262 aa  142  6e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_007963  Csal_2456  short-chain dehydrogenase/reductase SDR  39.37 
 
 
255 aa  142  7e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.588805  n/a   
 
 
-
 
NC_013922  Nmag_2910  short-chain dehydrogenase/reductase SDR  39.92 
 
 
251 aa  141  9e-33  Natrialba magadii ATCC 43099  Archaea  normal  0.640216  n/a   
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  37.5 
 
 
246 aa  141  9e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  38.4 
 
 
257 aa  141  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_004310  BR0243  short chain dehydrogenase/reductase family oxidoreductase  39.09 
 
 
244 aa  141  9.999999999999999e-33  Brucella suis 1330  Bacteria  normal  0.550186  n/a   
 
 
-
 
NC_004310  BR1122  short chain dehydrogenase/reductase family oxidoreductase  37.9 
 
 
246 aa  141  9.999999999999999e-33  Brucella suis 1330  Bacteria  normal  0.0726405  n/a   
 
 
-
 
NC_009505  BOV_0236  short chain dehydrogenase/reductase family oxidoreductase  39.09 
 
 
244 aa  141  9.999999999999999e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.117254  n/a   
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  40.5 
 
 
262 aa  140  9.999999999999999e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  37.9 
 
 
246 aa  141  9.999999999999999e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_013947  Snas_5056  short-chain dehydrogenase/reductase SDR  40.24 
 
 
249 aa  141  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  38.37 
 
 
250 aa  140  9.999999999999999e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4971  short-chain dehydrogenase/reductase SDR  38.62 
 
 
244 aa  140  1.9999999999999998e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.475551  normal  0.122144 
 
 
-
 
NC_007650  BTH_II1604  short chain dehydrogenase/reductase family oxidoreductase  40.57 
 
 
247 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2680  short chain dehydrogenase  41.11 
 
 
253 aa  140  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  0.313407  normal  0.819387 
 
 
-
 
NC_008254  Meso_3546  short-chain dehydrogenase/reductase SDR  37.96 
 
 
261 aa  140  1.9999999999999998e-32  Chelativorans sp. BNC1  Bacteria  normal  0.498935  n/a   
 
 
-
 
NC_008699  Noca_4009  short-chain dehydrogenase/reductase SDR  40.43 
 
 
240 aa  140  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  36.95 
 
 
269 aa  140  3e-32  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007794  Saro_1475  short-chain dehydrogenase/reductase SDR  35.77 
 
 
266 aa  139  3.9999999999999997e-32  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.388787  n/a   
 
 
-
 
NC_008009  Acid345_0643  short-chain dehydrogenase/reductase SDR  36.14 
 
 
271 aa  139  3.9999999999999997e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.224446 
 
 
-
 
NC_013132  Cpin_1988  short-chain dehydrogenase/reductase SDR  35.37 
 
 
260 aa  139  3.9999999999999997e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.730129 
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  38.72 
 
 
244 aa  139  3.9999999999999997e-32  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_010511  M446_5536  short chain dehydrogenase  37.1 
 
 
262 aa  139  3.9999999999999997e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2494  short-chain dehydrogenase/reductase SDR  41.09 
 
 
291 aa  139  7e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.60014  normal  0.0881916 
 
 
-
 
NC_011004  Rpal_0963  short-chain dehydrogenase/reductase SDR  40.73 
 
 
258 aa  138  7.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1429  3-ketoacyl-(acyl-carrier-protein) reductase  35.83 
 
 
256 aa  138  7.999999999999999e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.865814 
 
 
-
 
NC_011365  Gdia_0880  short-chain dehydrogenase/reductase SDR  40.24 
 
 
250 aa  138  8.999999999999999e-32  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A1699  oxidoreductase, short chain dehydrogenase/reductase family protein  36.59 
 
 
246 aa  138  1e-31  Yersinia pestis Angola  Bacteria  normal  normal  0.0105879 
 
 
-
 
NC_013947  Snas_2729  short-chain dehydrogenase/reductase SDR  40.08 
 
 
250 aa  137  1e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.189012  normal  0.165554 
 
 
-
 
NC_010465  YPK_2510  short-chain dehydrogenase/reductase SDR  36.59 
 
 
246 aa  138  1e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  38.93 
 
 
257 aa  137  1e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
NC_009708  YpsIP31758_2412  oxidoreductase, short chain dehydrogenase/reductase family protein  36.59 
 
 
246 aa  138  1e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1849  short chain dehydrogenase  38.49 
 
 
255 aa  138  1e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.838313 
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  34.43 
 
 
247 aa  137  2e-31  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_009484  Acry_0086  short-chain dehydrogenase/reductase SDR  39.04 
 
 
250 aa  137  2e-31  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1758  short-chain dehydrogenase/reductase SDR  41.73 
 
 
255 aa  137  2e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0228145  n/a   
 
 
-
 
NC_008687  Pden_3572  short-chain dehydrogenase/reductase SDR  39.02 
 
 
255 aa  137  2e-31  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0788  short-chain dehydrogenase/reductase SDR  36.33 
 
 
244 aa  137  2e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  38.25 
 
 
257 aa  136  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  38.25 
 
 
257 aa  136  3.0000000000000003e-31  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_009428  Rsph17025_1469  short-chain dehydrogenase/reductase SDR  39.52 
 
 
247 aa  136  3.0000000000000003e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.750079  normal  0.690842 
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  38.25 
 
 
257 aa  136  3.0000000000000003e-31  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  34.43 
 
 
247 aa  136  3.0000000000000003e-31  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_011886  Achl_0142  short-chain dehydrogenase/reductase SDR  40.74 
 
 
255 aa  136  3.0000000000000003e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007802  Jann_2106  short-chain dehydrogenase/reductase SDR  37.3 
 
 
244 aa  136  4e-31  Jannaschia sp. CCS1  Bacteria  normal  0.248002  normal  0.662433 
 
 
-
 
NC_007948  Bpro_3961  short-chain dehydrogenase/reductase SDR  36.03 
 
 
243 aa  136  4e-31  Polaromonas sp. JS666  Bacteria  normal  0.985096  normal 
 
 
-
 
NC_010501  PputW619_1425  short chain dehydrogenase  41.9 
 
 
253 aa  135  4e-31  Pseudomonas putida W619  Bacteria  normal  0.857979  normal  0.357324 
 
 
-
 
NC_009832  Spro_0638  short-chain dehydrogenase/reductase SDR  38.31 
 
 
246 aa  135  5e-31  Serratia proteamaculans 568  Bacteria  normal  0.368584  normal 
 
 
-
 
NC_013093  Amir_2079  short chain dehydrogenase  38.55 
 
 
255 aa  135  5e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  38.68 
 
 
246 aa  135  5e-31  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2281  short chain dehydrogenase  38.52 
 
 
257 aa  135  5e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.121478 
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  40.91 
 
 
262 aa  135  6.0000000000000005e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_007778  RPB_4528  Short-chain dehydrogenase/reductase SDR  39.27 
 
 
258 aa  135  6.0000000000000005e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.831809  normal 
 
 
-
 
NC_011369  Rleg2_1425  short-chain dehydrogenase/reductase SDR  37.76 
 
 
258 aa  135  7.000000000000001e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.315018 
 
 
-
 
NC_012858  Rleg_7201  short-chain dehydrogenase/reductase SDR  39.18 
 
 
244 aa  135  8e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.10023 
 
 
-
 
NC_012912  Dd1591_2736  short-chain dehydrogenase/reductase SDR  38.65 
 
 
255 aa  135  8e-31  Dickeya zeae Ech1591  Bacteria  normal  0.777047  n/a   
 
 
-
 
NC_007488  RSP_3972  3-ketoacyl-(acyl-carrier-protein) reductase  36.72 
 
 
263 aa  135  9e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  38.02 
 
 
266 aa  135  9e-31  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_007778  RPB_2094  short-chain dehydrogenase/reductase SDR  40.96 
 
 
244 aa  134  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  hitchhiker  0.00509935 
 
 
-
 
NC_007958  RPD_4366  short-chain dehydrogenase/reductase SDR  40 
 
 
259 aa  134  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.534322  normal 
 
 
-
 
NC_009720  Xaut_1996  short-chain dehydrogenase/reductase SDR  38.31 
 
 
247 aa  134  9.999999999999999e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  37.89 
 
 
250 aa  134  9.999999999999999e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A1264  Short-chain dehydrogenase/reductase SDR  39.92 
 
 
260 aa  134  1.9999999999999998e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3193  short chain dehydrogenase  35.86 
 
 
255 aa  134  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2224  short-chain dehydrogenase/reductase SDR  38.1 
 
 
251 aa  134  1.9999999999999998e-30  Chelativorans sp. BNC1  Bacteria  normal  0.475602  n/a   
 
 
-
 
NC_009720  Xaut_0432  short-chain dehydrogenase/reductase SDR  36.11 
 
 
258 aa  133  1.9999999999999998e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.315346 
 
 
-
 
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