| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1425 |
|---|
| Symbol | |
|---|
| ID | 6980153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1450039 |
|---|
| End bp | 1450815 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643396146 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002280945 |
|---|
| Protein GI | 209549028 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.315018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAA GAAACAAGGT CGCCCTGATC ACCGGCGGCA ACAGCGGTAT TGGTCTTGCG
ACTGCCAAGG TCTTTATCGA CGAGGGTGCA AAGGTCGTGA TCACCGGCCG CAATCCCGAA
ACGCTTGCCG CGGCCGAAAA GGCGCTTGGG GCCGGCGTCG TCGCGCTGAA GGTCGATGTC
ACCGATGCCG CCGCCACCGA GAAGGCCTTT GCGGAAGCCG CCGCAAAAGT CGGCAAGTTC
GATATCGTCT TCGCCAATGC CGGCATTGGC GGCGCGACAC CGCTCGGTGA CACGTCGCCG
GAGCAGTTCA ATCAGATCAT CAGCACCAAT CTGACGGCCG TCTTCTTCAC CGTGCAATCG
GCCCTGCCGC ATCTCAGCGA TGGCGGTTCG GTCATTCTCA ACGGTTCGGT GCACGCGGTG
CTCGGCGCGC CCGGCTGGTC GGCCTATGCG GCGACCAAGG CCGCGGTCCG GGCGATGACG
CGCAACATGG CCTCCGAACT CGCGCCGCGC GGCATCCGCG TCAATCAGGT GACTCCAGGC
GGCACGAAGA CGCCGATCTG GTCGCCGATG GCCCAGACGG AAGATGCGAT GTCGGCGCTC
GAAGCCCGCA TCGGCGGCAT GAGCCCGCTC GGCCGCATGA GCGAAGCCGA CGAAATCGCC
AAGGCGGCGC TTTACCTCGC TTCGGATGAT TCTGCCAATG TCACCGGCAT CGAGATCACC
GTCGACGGCG GCATGACGAG CGCCCCGTCC GGCGCCAAGA TCTTCCGCGC CGCATAA
|
|---|
| Protein sequence | MRLRNKVALI TGGNSGIGLA TAKVFIDEGA KVVITGRNPE TLAAAEKALG AGVVALKVDV
TDAAATEKAF AEAAAKVGKF DIVFANAGIG GATPLGDTSP EQFNQIISTN LTAVFFTVQS
ALPHLSDGGS VILNGSVHAV LGAPGWSAYA ATKAAVRAMT RNMASELAPR GIRVNQVTPG
GTKTPIWSPM AQTEDAMSAL EARIGGMSPL GRMSEADEIA KAALYLASDD SANVTGIEIT
VDGGMTSAPS GAKIFRAA
|
|---|
| |