Gene Dshi_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1429 
SymbolfabG 
ID5712606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1484787 
End bp1485557 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID641267342 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001532772 
Protein GI159043978 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.865814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CGAACACTTC GAGACGCCTG TCGGGCAAAA CCGCGATCGT GACGGGTGCC 
GCCTCCGGGT TCGGTCGCGA GATTGCCCGC CGGTTCGTGC GTGAAGGCGC CCGGGTGGCG
ATCGTGGACC TGAACGGCGA AGGCGCAAAG GCCGTCGCCG ACGCGTTGCA GCAGAATGCC
ATCGCGGTCA CCTGCGATGT CTCCAAGGGC GCGGATGTTT CGCGGGCCGT CCAAGAAACG
ATCGACGCTT TCGGGCGCGT GGATATCGCC ATCAACAACG CAGGCTGGAG CCACCGCAAT
CAGCCCGCGC TGGATGTGGA TTTCGAGACT TTCAAACGCG TTTATGAAGT CAATGTGGAC
AGCATCTTTC ATGCCACCCA TGCTCTGGTG CCCCATTGGC GTGACATCGG GGGCGGCGTG
ATGATCAATG TGGGCTCCAC CGCGGGTATC CGACCGCGCC CGGGTCTGAG TTGGTACAAT
AGCTCGAAGG GGGCCGTGAA CATGATGACC AAGACACTCG CCGTGGAACT GGCCCCCGAC
CGGGTAAGGG TCTGCGGTCT GGCCCCGGTC ATGGGCGCGA CGCCCTTGCT CGAGACCTTC
ATGGGAATGC CGGACACGCC GGAGAACCGC GCGAAGTTCC TCGGCACCAT TCCGTTGGGG
CGCCTGTGCG AGCCAGAAGA CATGGCCAAT GCGGCGCTCT ACCTGGCCTC TGACGAAGCG
AATTTCATCA CCGGCGTCAT CCTGGAGGTC GATGGCGGGC GGACGGTCTG A
 
Protein sequence
MTETNTSRRL SGKTAIVTGA ASGFGREIAR RFVREGARVA IVDLNGEGAK AVADALQQNA 
IAVTCDVSKG ADVSRAVQET IDAFGRVDIA INNAGWSHRN QPALDVDFET FKRVYEVNVD
SIFHATHALV PHWRDIGGGV MINVGSTAGI RPRPGLSWYN SSKGAVNMMT KTLAVELAPD
RVRVCGLAPV MGATPLLETF MGMPDTPENR AKFLGTIPLG RLCEPEDMAN AALYLASDEA
NFITGVILEV DGGRTV