Gene BBta_6893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6893 
Symbol 
ID5151108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7220389 
End bp7221189 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID640561575 
Productputative 3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001242686 
Protein GI148258101 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00227102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0503904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAG CACCAACGGC GATGCCGAAC GACAAGGTCG CCTTGATCAC CGGGGCAGCG 
CGCGGCATCG GGCTTGCGAC CGCCAAGCGG TTTCTCCACG AGGGCTGGCG CGTGGCCCTG
CTCGACATCG AGCAACAGCT GCTCGACAGC GCCACATCCT CTCTCCGATG CCCGGATCGA
ACGCTCGCGC TGCATTGCGA TGTCTCGGAC GCGGCCATGG TGGCCGATGC GCTGGAGCGC
ATCACCCGGC GGTTCGGCCG CCTCGATGCG CTGGTCAACA ATGCCGGCGT CGCGCGCTTC
GCCCCGATCA TGGAGACGAC CGAGACCGAC TGGCAACGAA TCCTCGACGT CAATCTGACC
GGACCGTTTC TTTGCACGCG GGCCGCGGTG CCGCTGATGC GCGAGCATGG CGGGGCCATT
GTCAACATCA CCTCGATCTC GGCCGTGCGC GCGTCCACGC TGCGCTCCGC CTACGGCACC
AGCAAAGCGG CCCTGGCGCA TCTGACCAAG CAGCTCGCGG TGGAACTCGC CTCCGCCGGC
ATCCGCGTCA ATGCGGTCGC GCCCGGACCG GTGGAGACCG CGATGGCGAA GGCCGTTCAT
ACGCCGGAGA TTCGCGCCGA CTATCACGAC GCGATCCCGC TCAACCGCTA CGGCCTTGAA
GAGGAGCTGG CGGAAGCCAT CTTCTTCCTG AGCTCGGAGC GATCGAGCTA TATTACGGGC
CAGGTGCTGG CGGTCGACGG CGGCTTCGAC GCGGCCGGAA TCGGGCTGCC GACCTTGCGC
GGTGAACGCA GGAACGCATA G
 
Protein sequence
MTEAPTAMPN DKVALITGAA RGIGLATAKR FLHEGWRVAL LDIEQQLLDS ATSSLRCPDR 
TLALHCDVSD AAMVADALER ITRRFGRLDA LVNNAGVARF APIMETTETD WQRILDVNLT
GPFLCTRAAV PLMREHGGAI VNITSISAVR ASTLRSAYGT SKAALAHLTK QLAVELASAG
IRVNAVAPGP VETAMAKAVH TPEIRADYHD AIPLNRYGLE EELAEAIFFL SSERSSYITG
QVLAVDGGFD AAGIGLPTLR GERRNA