| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4971 |
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| Symbol | |
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| ID | 5318034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1485615 |
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| End bp | 1486349 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776753 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001313685 |
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| Protein GI | 150377089 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.475551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.122144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGA ACCTTGCCGG AAAGGTCGTC CTCGTCACAG CTGCGGCGCA GGGGATAGGG
CGCGCAACCG CACTCGCCTT CGCCAGAGCC GGTGCCAAGG TTCACGCGAC GGATATCAAC
ACCGACGCCC TTGGCAGCTT CGGAGGCGAG GCGGGTATCA GCACCCATCG GCTGGATGTC
CTCGACACCG CCGCGGTCGA GGCGCTGATC ACCGAGACCG GTGCCGTCGA CGTGCTTTTC
AACTGCGCCG GCTTCGTCCA TGCTGGCTCG GTACTCACGA TGAAGGACGA GGATCTCGAC
TTCGCCTTCG ACCTAAACGT CAAGTCGATG ATTCGTACCA TCCGCGCGGT CCTGCCCGGC
ATGATCGCAC GCAAGGACGG TTCGATCATC AACATGGCTT CCGTGGCTTC CAGCATAAAG
GGCGTGCCGA ACCGCTTCGC CTATGGCGTG ACGAAGGCGG CGGTCATCGG GCTGACGAAA
GCCGTTGCTG CCGATTACGT GGGTGACGGC ATCCGCTGCA ACGCAATCTG CCCCGGAACG
GTCGAAAGCC CGTCGCTCGA GAGCCGCATG CGGGCGCAGG GAGACTACGA GACTGCGCGT
GCGGCCTTCA TCTCCCGCCA ACCGATGGGT CGTCTCGGAA CGCCCGAAGA AATCGCCGAT
CTCGCCGTAT ATCTCGCCGG CGCAACTTAC ACCTCGGGTC AGGCCTATGC CATAGATGGC
GGCTGGACCA TTTGA
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| Protein sequence | MTANLAGKVV LVTAAAQGIG RATALAFARA GAKVHATDIN TDALGSFGGE AGISTHRLDV
LDTAAVEALI TETGAVDVLF NCAGFVHAGS VLTMKDEDLD FAFDLNVKSM IRTIRAVLPG
MIARKDGSII NMASVASSIK GVPNRFAYGV TKAAVIGLTK AVAADYVGDG IRCNAICPGT
VESPSLESRM RAQGDYETAR AAFISRQPMG RLGTPEEIAD LAVYLAGATY TSGQAYAIDG
GWTI
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